Shewanella eurypsychrophilus: FM038_008635
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Entry
FM038_008635 CDS
T07746
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur00061
Fatty acid biosynthesis
seur00071
Fatty acid degradation
seur01100
Metabolic pathways
seur01212
Fatty acid metabolism
seur02024
Quorum sensing
seur04146
Peroxisome
Module
seur_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FM038_008635
00071 Fatty acid degradation
FM038_008635
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FM038_008635
09145 Cellular community - prokaryotes
02024 Quorum sensing
FM038_008635
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
seur01004
]
FM038_008635
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
seur04147
]
FM038_008635
Enzymes [BR:
seur01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FM038_008635
Lipid biosynthesis proteins [BR:
seur01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FM038_008635
Exosome [BR:
seur04147
]
Exosomal proteins
Exosomal proteins of breast milk
FM038_008635
Exosomal proteins of breast cancer cells
FM038_008635
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QPG57500
UniProt:
A0ABX6V685
LinkDB
All DBs
Position
complement(2053360..2055078)
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AA seq
572 aa
AA seq
DB search
MEASFWNGKRAPGISDSIDLTAYSSAVEAIEEAFIKYPDRPAFTSLGHTLSYKEIDQYSA
AFAHYLQNHTALVPGDAIAIQMLNTLQYPIAVFGAMRAGLRIVNTNPLYTEREMIHQFND
SGAKALLCMDIFAKSVENIQGDTNLELIITTSLADMVPGVKRLIINSTVKHIKKMVPKYH
LPQAESFRKLLKQSFGKGFKPAHLSQPEDTIVLQYTGGTTGVAKSAELTNANIIANMLQA
GSVVRQHDEHGEPMMKGKQSIMVAPLPLYHIYSFTVHLMAFFRLGEHSVLIANPRDTETF
IKAMKPFKITGLMGLNTLFVSLMESDNFKQLDFSEMKFTLSGGTALMDDTANRWKAITGV
GISEAYGLTECSPAVCMNPINGLERVGTVGQALQHTALKCIDALGDEVPVGQRGELCVKG
PQVMKGYWNRPKATRESFTQDGDWLLTGDVAIIDEDGYVSIVDRVKDMIIVSGFNVFPNE
IEAVVSEHPDITNCAAIGIPDSKTGEAVKLYIVTHNNITLTAEEIRAFCKDKLTNYKIPR
QFEFRKELPMSPVGKILRRKLKEDSTGEQKIA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatcgttttggaatggtaaacgcgccccggggatctctgattctatcgattta
acagcatacagctccgcagtagaagcgatagaagaagcttttatcaaataccctgacaga
ccagcatttaccagtctcggtcacaccctgagttataaagagatagatcaatatagcgcg
gcctttgctcactatttgcaaaatcacaccgcactcgttccaggtgatgccattgccatt
cagatgctcaataccctgcagtaccctattgctgttttcggagccatgcgagccggatta
cgtatcgtcaataccaatcctttgtacaccgaacgtgagatgatccatcagtttaatgac
tctggtgcaaaagctctcttgtgcatggatattttcgccaaatcggttgaaaatatacaa
ggtgataccaatctagagctgatcatcaccacctcgcttgccgatatggtccctggtgta
aagcgtctgatcatcaactctaccgttaaacatattaagaagatggtgcctaaataccat
ctgccccaagctgagtcatttcgaaagctactcaagcagagtttcggtaaaggctttaaa
ccagcacatctgagccaacctgaagataccattgtcttgcaatacactggagggactact
ggcgtcgctaaaagtgcagagctcaccaacgccaatatcatcgctaacatgttacaggca
ggctccgtagtgcgtcagcacgatgaacatggcgagcctatgatgaaaggcaagcaatct
atcatggtcgcgccgctgcctctttatcatatctattcgtttactgttcacttgatggcc
tttttcagactcggtgagcacagcgtgctgattgcgaatccaagggatactgagaccttt
atcaaggcgatgaagccctttaagatcactggccttatggggcttaacacattgtttgta
tcactgatggagagtgacaacttcaaacaactcgactttagtgagatgaaatttaccctc
tcaggtggcacggccttgatggatgacacagctaaccgctggaaagcgatcacaggggtg
gggatatctgaagcctatggtcttacagagtgttcacccgccgtctgtatgaacccaatt
aatgggttagagcgagtcggcactgtggggcaagctcttcagcataccgcccttaagtgc
atcgatgcgctcggtgatgaagtccctgtgggtcagcgcggcgagctgtgcgtaaaaggc
ccacaagtcatgaaaggctattggaatcgtcccaaagccacccgagaatctttcactcaa
gacggtgactggttactcacgggagatgtggccattattgacgaagatggctatgtcagc
attgttgatagagtcaaagatatgattatcgtctctggctttaatgtctttcctaacgag
attgaagctgtggtgtctgagcatccggatatcaccaactgcgcagcaattggcataccc
gatagcaaaaccggtgaagcggtgaaactctatatcgtcactcataacaatatcaccctg
actgctgaggagatcagggcattttgcaaagacaagctgactaattataaaattccacgc
cagtttgaatttcgtaaagaactgcctatgtctccagtcggtaaaattttacgccgtaaa
cttaaggaagatagcactggggaacaaaaaatcgcctaa
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