Shewanella eurypsychrophilus: FM038_009175
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Entry
FM038_009175 CDS
T07746
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur00020
Citrate cycle (TCA cycle)
seur00190
Oxidative phosphorylation
seur00650
Butanoate metabolism
seur00720
Other carbon fixation pathways
seur01100
Metabolic pathways
seur01110
Biosynthesis of secondary metabolites
seur01120
Microbial metabolism in diverse environments
seur01200
Carbon metabolism
Module
seur_M00009
Citrate cycle (TCA cycle, Krebs cycle)
seur_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
seur_M00149
Succinate dehydrogenase, prokaryotes
seur_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FM038_009175 (sdhA)
00650 Butanoate metabolism
FM038_009175 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
FM038_009175 (sdhA)
00720 Other carbon fixation pathways
FM038_009175 (sdhA)
Enzymes [BR:
seur01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
FM038_009175 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
FAD_oxidored
FAD_binding_3
Thi4
Motif
Other DBs
NCBI-ProteinID:
QPG57598
LinkDB
All DBs
Position
2184912..2186678
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AA seq
588 aa
AA seq
DB search
MSIPVREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDHWEQHMYDTVKGSDFIGDQEAIEFMCKTGPEAVIELEQMGLPFSRFENGTIYQRPFG
GQSRNFGGEQAARTAAAADRTGHALLHCLYQQNVKHKTEVFSEWYALDLVKNEDGVIVGC
TAIDIESGEIVYFKAKATILATGGAGRIFASTTNAHINTGDGVGMAMRAGVQMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG
RGLDGPLGPHLLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMGGL
PAKVSGQVIRQNSDGTEQDIVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG
KALDETADPKDATDADIAKSLDRLNRWESNKDGEDPTQIRKDLQLCMQLNFSVFRSGDAM
AEGLAELKAIRKRLANAKLSDNSTEFNTQRIECLELDNLMATAIATAYAANYRTESRGAH
SREDFLDRDDENWLCHSVFDPVTEEMNKRDVNMKPKLRAAFPPIKRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattccagttcgcgagtttgatgcagtcgttattggtgccggtggtgcgggtatg
cgagcagcactacagatttctaaagaaggtaagagctgcgcgcttttatctaaagttttt
cctactcgttctcatactgtgtctgcacagggtggtattactgtagcactaggtaatgcc
catgaagatcattgggaacagcacatgtacgataccgtgaaaggttccgattttatcggt
gaccaagaagcgattgagttcatgtgtaaaacaggtccagaagcggttattgagctagag
caaatgggacttccattctctcgtttcgaaaacggcactatctaccaacgtccgtttggt
ggtcaatcaagaaattttggtggcgagcaagcggctcgtactgcagcagcagctgaccgt
acgggtcatgctctgcttcattgtttgtaccagcaaaatgttaagcataaaaccgaagtt
ttttctgagtggtatgcactcgatttagtgaaaaacgaagacggcgtcattgttggttgt
acggctatcgatatcgaaagcggtgaaatcgtttatttcaaagcgaaagcaaccattctt
gcaaccggtggtgcgggacgtattttcgcctcgacgaccaatgcacatatcaatactggc
gatggtgttggcatggcaatgcgcgctggcgtgcagatgcaagatatggaaatgtggcag
ttccacccaaccggtattgctggtgcgggtgtactggttacagaaggttgtcgtggtgaa
ggtggatatcttctcaataaagatggcgaacgcttcatggagcgttatgcaccgaatgcg
aaagatttagcctcacgtgacgtggtagcacgttcgatgatgactgaaattcgtgaaggt
cgcggtcttgatggtcctttaggtccgcacttgctactcaagctggatcatttaggtaaa
gagacactagaagcgcgtcttcctggtgtttgtgaactgtctcgtacattcgctcatatc
gatccggccgatggtccaatccctgtattaccgacatgtcattacatgatgggtggtttg
ccggctaaagttagcggacaagtgatccgtcaaaatagcgatggcactgagcaagatatt
gttggcctattcgctgttggtgagattgcctgtgtatcggtacatggagcaaaccgctta
ggtggtaattcactgcttgatttagtggtatttggacgcgcagccggtcaacatttagga
aaagcgcttgatgaaactgccgatcctaaagatgcaacggatgctgacattgccaaatca
ctcgaccgtctgaatcgttgggaaagcaacaaagacggcgaagaccctacacaaatccgt
aaagatttgcagctttgtatgcagcttaacttctcagtattccgtagtggagacgctatg
gctgaaggtcttgcagagcttaaggccattcgcaagcgtctagccaatgctaaattgtct
gacaattcgacagaatttaacactcagcgtattgagtgtttagagctagataacttgatg
gctacggcgattgcaacggcttacgcggcaaactaccgcacagaaagccgcggtgcgcac
tctcgtgaagactttttagaccgcgatgatgagaactggttatgtcacagtgtcttcgac
ccagttactgaagagatgaataagcgtgatgtgaatatgaagcctaagcttcgtgccgcc
ttcccaccgattaagcgtacttactaa
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