Shewanella eurypsychrophilus: FM038_010580
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Entry
FM038_010580 CDS
T07746
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
seur02000
]
FM038_010580
Transporters [BR:
seur02000
]
Other transporters
Pores ion channels [TC:
1
]
FM038_010580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF4210
Fucose_iso_C
Motif
Other DBs
NCBI-ProteinID:
QPG57851
LinkDB
All DBs
Position
complement(2485564..2489451)
Genome browser
AA seq
1295 aa
AA seq
DB search
MTHQVEQQDEASSVKSNRRYVLWRSFKGFCRTVIYIPLGILITVAILIGTDFGSRITVFV
ADSLVPDLDITYVDGAINNRLSLTNVHWKMVGVSVELDDLVLDWHPLCLLRKQLCVDELS
ASRVIVDVDTSIPAKEDETGIKANSSPIPNADHKVNTHIQAEEAGDDIHEEITLPFGIDL
TKADLANVKVRVDDMHFNATRLQTRAQWQATGIRVNYLTSNGLLVDIPLSGDSAEQSKDK
NEQAESWTMANLPQVFMPIPVFAEQVSLNNSHLRLGQRDDIFNKIEFEASYHSFLIHVEK
LLVEHTYGNVILEGEISLIDDYPMDFIADINASNVKEVPSLSQQHLNLNVSGGFNKLSVE
AKGQGDVDFSLNGDIALAEPRLAYQLSLTARQLGWPIDSNTYSAKDIELSTSGNTDSQKV
SFSGRVNTPYHPILNVDTQLTHSGSRVDISHLRAKGLIGEVEASGHISYGNIISWDADIN
TIDFDMQQLALMLENPLPESFISGRLSTQGQVKDSQWHVAISRSELAGEIQGYPFELIGD
LSLNEKFNLSAENLTFSALQSVLTISGTADENWAVNANLDIPDLNLWQADSSGSINAKIN
VSGENEHPEVFIYADVQQLQYTDIQLDHALIKGTYRPLDNQDFALSVRAGNLNYDSVKLD
SITLGVKGDENKQKLRLETRGDYQVNTKVYSNFNRETETLQAEVRAFNIDSFLGAWSLED
ALTVSWDNLKQTGLVTRFCLFNLNGKLCLDDPAELGENGDASLLFEGDVGAILAPLLPDN
ILWQAQAKLTSHIIWAENQKPQGALDLAFEPGHLSLNDNNRNVDIGYKTLALQARLDEEY
LSTRLQFDSHDIASWEGKLDISVTPDRSLSGYTRLHKINLKALSEFLPQLETIEGNISSQ
LQIAGTLAKPSISGKLQLENGELLAAANPTLLEDIQISMSLSGQKAILEGQWQMGEGQAE
LSGSLDWSAEQFKGAIKLDGDNLAIIQPPFAIVNLSPNLTLNFNKDSFDVVGAIDVPSGH
IKIVQLPEGGVAVSQDVVFNDRTSSGVVNQSPVALTTDIKINISDKLRIDGMGLRGKLIG
TLDLKQEAFKPPLLYGDIRVIDGKYKFMGQTLDIKAGEVQFIGPLEVPNLNIEAVREIKD
EDVVAGVRITGTPLKPVVTLFSSPAKEQAEILSYIIKGTGFHSNDNAQNSGLMLGAALTL
TNQIGGGAVNNIGDSATGLIEKLGFSNVQLDANDDGRVAISGFIGDDLMVKYGYGVFNPG
YEMTVRYYLLSQLYLETVSGTIEQSLDIYYNFDID
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcaagttgaacaacaagatgaagcatcatcagtaaaatcgaatcgacgatac
gtactttggcgcagtttcaaaggtttttgtcgaactgtcatatatatccccttaggcata
ctgatcactgtcgccatcttgattggtaccgatttcggtagtcgcataacggtatttgtt
gcagatagcttagtaccagacttagatatcacctatgtcgatggcgcgatcaacaacaga
ttatcactcacaaatgttcactggaaaatggttggcgtttcagttgaacttgatgactta
gtcctcgattggcaccccttatgtttactgcgtaagcagctctgcgtggatgaattatca
gcctcgagagtcattgtcgacgtagacacttctattcctgctaaagaagatgaaacaggt
attaaagctaattcgtcgccgattccaaatgcggaccacaaagtaaacacacacatccaa
gctgaagaagctggcgatgatatccatgaagagatcaccctcccctttggcatcgacctc
actaaagccgatttagccaatgtaaaagtcagagtcgatgatatgcatttcaatgccact
cgactacaaacaagagcgcagtggcaagctactggaataagagttaactatttaacgtcc
aatggcctcttggtcgatatacctttatcgggcgattcagctgagcaatctaaagataaa
aatgaacaagctgagagctggaccatggcaaacctgccccaagtgtttatgcccattcca
gtttttgccgaacaggtttcactgaacaacagccacctcagattagggcagcgagacgat
atttttaataaaattgaatttgaagccagttatcatagcttcctcattcacgtcgaaaag
ctcctcgtggagcatacctacggtaatgtcattctcgaaggggaaatatcccttatcgat
gattacccaatggactttattgccgacataaatgccagtaatgtcaaagaagtacctagc
ctcagtcagcagcatctaaacctaaatgtatcaggtggtttcaacaaactaagcgttgag
gctaagggacaaggggatgtcgattttagcctcaatggcgatatagcccttgccgaaccc
agattagcttatcagctatctctaaccgctcggcaacttggttggcctattgatagtaat
acttattcagccaaagacattgagttatcaactagcggtaacacagatagtcaaaaggtg
agtttttcaggacgagtaaataccccctatcaccccatactgaatgtcgatacccaatta
acccatagtggctcccgagttgacatatcccaccttagggcaaaaggcttgattggcgaa
gtagaagcatctggacatatcagctacggcaacatcattagctgggatgctgatatcaat
acgatcgacttcgatatgcagcaattagcattaatgctggaaaatccattaccggaaagc
ttcattagtggcagattaagcactcaaggtcaggttaaggatagtcaatggcatgttgcg
atatcacgctctgaattagccggagagatccaaggctatccctttgagcttattggtgat
ctgagtttaaatgagaagtttaatcttagtgccgaaaatttaaccttcagcgctctacag
tcagtattgaccatttccggtacagccgatgaaaattgggctgttaacgctaatttggat
attcccgatctcaacctttggcaagctgattcatccggcagtattaacgctaagataaat
gtctctggtgaaaatgaacaccctgaagtcttcatctatgcggatgttcagcaattgcag
tatacagacattcaattggatcacgccttaataaaaggtacttatcgtcctcttgataat
caagattttgcattatcagtcagagcgggaaacctcaattacgattcagtaaagctagat
tccatcacgctgggggtaaaaggagacgaaaacaaacaaaagttgagacttgaaaccaga
ggagactatcaagttaacactaaggtctattccaattttaatcgtgaaactgaaacccta
caggcagaagttcgtgcattcaatatcgactctttcttaggggcctggtccctagaagat
gctttgaccgttagttgggataacctcaagcaaacaggtcttgttacaaggttttgctta
tttaacctcaacggcaaactttgtttagatgaccccgctgaactcggtgaaaatggtgat
gccagtctattatttgaaggtgatgttggtgccattttagcaccgttattacctgataat
attttatggcaagcacaggctaaattaacctctcacatcatatgggccgagaaccaaaaa
ccacaaggggcactagacttagcctttgagcctggccacctcagcttaaatgataataat
cgtaatgttgatattggctataaaaccctggcattacaggcaagacttgatgaagagtac
ctgtcgactcggctacaatttgactctcatgacattgctagctgggaaggtaaactggat
atctctgtcacgccagacagaagtttatccggctatacaaggctacataagattaacctt
aaggctctatcagaatttttgccccaactagagactatagaaggaaatatttcaagccag
ttgcagatcgcaggtaccttagcaaagccgagcatctcaggtaagttgcagctagaaaat
ggcgaactcttagctgctgctaatccaaccttactggaagacattcaaatatcgatgtca
ttatcaggacaaaaagcgatcctagaaggtcaatggcaaatgggggaaggccaagcagaa
ctgtctggcagtcttgactggagcgcagaacagttcaaaggcgcaattaaattagatggc
gacaatctagccattattcaaccaccgtttgccatcgtcaatttatctccaaatttaacg
ttaaatttcaataaagacagttttgatgtggttggagccatcgatgtgccatcgggtcat
atcaaaatagtgcaattaccagaaggcggtgtcgctgtttcccaagatgttgttttcaat
gaccgtacctcatcaggtgtggtaaaccaaagcccggtcgccctaaccacagatatcaag
ataaatatttccgataaattacgcattgacggtatgggattgagaggaaaattaatcggc
accttagatttaaaacaagaagcatttaagcctccactcctatacggcgatatccgtgtt
attgatgggaaatataaatttatggggcaaactctagacatcaaagcgggtgaagtacaa
tttattggcccattagaagtgccaaatctcaatattgaggctgtcagagaaattaaagat
gaggatgttgttgctggggtcaggatcacaggcacaccgctcaaacctgtcgttacgctt
ttctcttcccccgccaaagagcaagcagagatcctttcctacatcattaaggggactgga
ttccacagcaatgataatgctcaaaatagcggtttaatgttaggggcggctctcacctta
acgaaccaaataggggggggagcagtgaacaatattggcgactctgcgactggcttgatt
gaaaaattaggtttttcgaatgtgcagctcgatgccaatgatgatggacgcgtagcgatc
agtggctttattggcgatgacctcatggtcaagtacggctatggtgtttttaatccaggt
tatgagatgacggtaagatactacctgttatcacaactctatttagaaaccgtctctggc
acgatagagcaatcattagatatctattacaacttcgatattgattaa
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