KEGG   Shewanella eurypsychrophilus: FM038_010865
Entry
FM038_010865      CDS       T07746                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
seur  Shewanella eurypsychrophilus
Pathway
seur03030  DNA replication
seur03430  Mismatch repair
seur03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:seur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FM038_010865 (dnaQ)
   03430 Mismatch repair
    FM038_010865 (dnaQ)
   03440 Homologous recombination
    FM038_010865 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seur03032]
    FM038_010865 (dnaQ)
   03400 DNA repair and recombination proteins [BR:seur03400]
    FM038_010865 (dnaQ)
Enzymes [BR:seur01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FM038_010865 (dnaQ)
DNA replication proteins [BR:seur03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FM038_010865 (dnaQ)
DNA repair and recombination proteins [BR:seur03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FM038_010865 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: QPG57901
LinkDB
Position
2568131..2568856
AA seq 241 aa
MNLISSAKRQVILDTETTGMNQAAGAIYLGHRIIEIGCVEVINRKLTGRHYHEYINPQQI
IDEEAIEVHGITNEYVANKPKFAEISSSFLKFIEGAEVVAHNAPFDISFMDHEFSLLQPK
GPKTADICSILDTLDIAKHIHPGQKNNLDALCKRYGIDNSRRTLHGALLDAEILADVYLM
MTGGQTKFNLSGEGSDSAGGIKRLLSSRTKLKVIAASADELAKHEERLDLVAKGGQCVWR
G
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaacctaatttctagtgcaaaacgccaagtaattcttgatacagaaaccactggtatg
aaccaggctgccggtgcaatttatctcggtcatagaattattgaaattggttgtgttgag
gtgattaaccgtaagttgacggggcgacattatcacgaatatatcaacccgcaacagatc
attgatgaagaagctattgaagtacacggtattaccaatgaatatgtcgctaacaaacca
aaatttgctgagatatcttctagcttcttaaagttcattgagggtgctgaagtcgttgcg
cacaacgcgccgttcgatattagttttatggatcatgagttttctctactgcagcctaag
ggcccaaaaactgccgatatctgttcaattttagataccttagatattgctaaacatatt
catccgggtcagaagaataaccttgatgctttatgtaagcgctatggcatagataactct
cgccgtacccttcacggtgcattgttagatgctgaaattttagccgacgtttacctgatg
atgacgggtggacaaactaaatttaatttatccggcgaaggcagtgactctgcaggcggg
atcaaacgcttactttcttctcgtactaaacttaaagtgattgcagcatcggccgatgaa
ctagctaagcatgaagaaagattagatttagtagcaaaaggtggccagtgtgtttggcgc
ggttaa

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