KEGG   Shewanella eurypsychrophilus: FM038_012285
Entry
FM038_012285      CDS       T07746                                 
Name
(GenBank) UvrD-helicase domain-containing protein
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
seur  Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:seur00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:seur03400]
    FM038_012285
Enzymes [BR:seur01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FM038_012285
DNA repair and recombination proteins [BR:seur03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FM038_012285
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C Zn_ribbon_Top1 AAA_30 UvrD_C_2 AAA_12 ResIII SAM_KSR1_N
Other DBs
NCBI-ProteinID: QPG58133
LinkDB
Position
complement(2891106..2894135)
AA seq 1009 aa
MELRRHAVKFGFLQGLFFAKTASLCDRGLAIDGRLFNYPSIDKTVTVRAGWFTETLVWGD
NKFTFFRFTPSKSLFKLAKHNRLVSCRPGLLQTYDDLLVDITSFDEEFSQHQRFLRHSDR
TRLQQGYLGTLAAFKLTPHFKAFGFDVTLLNCRLAKFIKQPEQFTTKYNQWWQGKQLESY
QGLFDSLETHPLTSLQRQACVIDENNTLVIAGAGTGKTSTMAAKAAYLVKQGLAKPEEIL
MLAYGKDAMVELKERVDGIAGLNTVKVSTFHGLGKEIIQSYLNSSTQVSVLASDTKKFTQ
FVDQQIDAIVSDPKMADPVAEYFGRYLYPQVNELDFKTQGQYRSYLKNNEIRALSGDLVK
SFQELTICNYLYTHGIQFQYEPKYAISVSEPGKSAYQPDFYIPVLDAYLEHFGIDKQGNT
RPDIDKTAYNLSREWKIETHQGNNTCLLQTFSWQADKGQLEKHLETLLCERCEEIGMDED
QLFKPLSPEAVFAQVKALGVYRNVSRLMSSFLSLFKASSFSLADLELIKLTPASVNKDKS
DKQSTLYNQVRWKAFLHLFRWVIAKYEAHLRSLNTLDFSDMISQSVDLIGASDFHQKTDG
QFRFKYIMVDEFQDISAERAKLVTQLRDSRPGCALFCVGDDWQAIYRFTGSDLKLTTEFK
QAFGETQVVTLDKTFRFNDRIEKVASSFIQANPAQLKKTLTTHTVSDDPEVCLLINSKET
GLEQAFDRIVEVMDSGCERAQSSGLDLGLDKAVRKGAGKAKELGFTSVMVISRFNSSLKN
LSVWQKRYPQLQISGCSAHGSKGKQADFVIMLDVNDDKYGFPSKIASDPILEALLPKLDD
YAYTEERRLFYVALSRAKKSVFVQAELGKESVFVKELRTYKHDVRCFLSDLAPLYIDSLS
CPECNEGKLIPTQGRYGLFYTCSLGHHYCDTKLDACTSCNSAPMLRNETHHVCASEQCGH
QQQVCPECVSGKLIMRTNSKSGKAFLACSLHRMKDVNSCQYTRSLVELR
NT seq 3030 nt   +upstreamnt  +downstreamnt
atggagcttaggcgacatgcggttaaatttggttttctgcaggggctgttttttgctaaa
acggcaagtttgtgtgatcggggtttagccattgacggtagattatttaactatccgagc
atcgacaaaaccgttaccgtgagggctggttggtttactgagaccttggtgtggggtgac
aataagtttacctttttcaggttcactccaagcaaatctctgttcaaattagctaagcac
aacagacttgtgtcttgtaggcctggtttactgcaaacatacgatgacttgctcgtggat
attactagctttgatgaagagtttagtcagcaccaacgtttcttgcgtcattcagacaga
acacgcttacagcaaggttaccttgggaccttggctgcgttcaaactcacgcctcatttc
aaagcatttggctttgatgtcactctgcttaattgccgattggctaagtttattaagcaa
ccagagcagtttacgactaaatataatcaatggtggcagggtaagcaattagagtcttat
caaggactgtttgattcactagaaactcatcctttaacatcgctacagcgccaggcgtgc
gttatcgatgagaacaataccttagtcattgccggtgcggggacggggaaaaccagcacc
atggcggccaaggccgcgtatctggttaaacagggtttggctaagcccgaagaaatcttg
atgctggcttatggtaaagatgccatggttgaactcaaggagcgggttgatggtattgcg
ggccttaatacggtaaaggtgagtacctttcatggcctaggcaaagagattattcaatct
tatctcaatagctctactcaagtgtcagtgcttgccagtgatactaagaagtttacgcaa
tttgtcgatcaacagattgatgccattgtctccgatccaaaaatggccgatcctgttgcc
gaatattttggccgttatctgtatccccaagtgaacgaactagattttaaaactcaaggt
caataccgttcataccttaaaaataatgagattcgagcgctttctggcgacttggtgaag
agcttccaagagctcactatctgtaattatctttatactcacggcatacagtttcagtat
gagcccaaatatgcaatttcagtcagtgagccggggaaaagtgcttatcaacctgacttt
tatattccggtgctcgatgcttacttagagcattttggtatcgataagcaaggtaacact
cggccagatatcgataaaactgcctataacctgagccgtgaatggaaaatagagactcat
caaggtaataacacctgtttattgcagacctttagctggcaagctgacaaggggcagtta
gagaagcacttagaaaccctgctatgtgagcgttgtgaagagatagggatggatgaagat
caattgtttaaacctttatcacccgaagccgtttttgctcaggtaaaggccttgggcgtc
tatcgcaatgtcagtcggctaatgtcgagttttctgtctctttttaaagcttcgagtttc
tcgttagccgatcttgaactgatcaagctgacaccagctagtgttaataaggataagagt
gataaacaaagtaccctttataatcaagtcagatggaaagccttcttgcacctgtttagg
tgggtgatagccaagtatgaggcgcacttaaggtcgcttaacactttagatttttccgat
atgatcagccaatcggttgatttaatcggtgcgagtgactttcatcagaagacagacgga
caatttcgttttaagtacataatggtcgatgagtttcaggatatctctgctgagcgcgcc
aagctggtgacgcaattgcgggattcaagacctggttgtgcgctgttttgtgtgggtgat
gattggcaggcgatttatcgctttaccggcagcgaccttaagctaaccaccgaatttaag
caggcttttggcgagactcaagttgtcaccttagataagaccttcaggtttaacgatagg
atagagaaggttgcttcaagctttattcaagctaacccggctcagctaaagaaaaccctg
actacccacactgtcagtgatgatcctgaagtttgtttattgattaactcaaaagagaca
gggctagagcaagcttttgatcgcattgttgaggttatggactctggctgtgaacgagct
caaagctctggcttagacttaggcttagataaggcggttaggaagggtgcagggaaagca
aaagagctaggttttacgagcgtgatggtgatcagccgttttaattcttcgttgaaaaat
ttaagtgtctggcagaaacgctatccacaactacagatctctggctgttcggcccatggc
tcaaaaggaaagcaggccgactttgttatcatgctcgatgtgaatgatgacaaatatggc
tttccgagcaagattgcgagcgatccgattttagaagctttgctgcctaagcttgatgat
tatgcctataccgaagagcgccgcttgttttatgtcgccttatccagagctaaaaagtcg
gtatttgttcaagcagaactgggtaaggagtcagtctttgtcaaagagctgcgtacttac
aaacatgatgttcgctgtttcctcagcgatcttgcacctctgtatatcgactcattatct
tgccccgaatgcaatgaaggtaagcttattccgacgcaagggcgctatggcctattttat
acttgctcattaggccatcattattgcgataccaagttggacgcatgcacgagttgtaac
agcgctcctatgttacgcaatgaaacccatcatgtatgcgcatctgagcaatgtggccat
caacaacaagtttgccctgagtgtgtgtcaggcaagcttatcatgcggaccaacagtaaa
agcggcaaggcgtttttggcttgtagcctgcacagaatgaaagatgtgaatagctgtcaa
tatacgagaagtttagtagagctaagatga

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