Shewanella eurypsychrophilus: FM038_013005
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Entry
FM038_013005 CDS
T07746
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seur03009
]
FM038_013005
Enzymes [BR:
seur01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
FM038_013005
Ribosome biogenesis [BR:
seur03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FM038_013005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Ubie_methyltran
FtsJ
MTS
GCD14
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_4
Methyltr_RsmF_N
Methyltransf_15
PrmA
Methyltransf_5
NSUN5_fdxn-like
Motif
Other DBs
NCBI-ProteinID:
QPG58260
UniProt:
A0ABX6V7F3
LinkDB
All DBs
Position
complement(3064995..3066209)
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AA seq
404 aa
AA seq
DB search
MLNSPLSPSSTELVINVLDMVLTEGKPLDRAYSHHFSGLQLAPSEQARITVVAGDLLRRL
NLYCYLSDVKFEEMSRMGTRLLNVWHMFHGLEVPKMQYALQVDEKTYFERLEKAKTQPAL
WDGCPEWLDQMGQAQLGDAWATERAALSKQPKRFIRVNLLKCTRDELGKKLRNEQVQTQE
VEGVETALEVTSDSALFRTESFKKGWFEQQDAGSQLVAAALDAKPGMRVIDACAGAGGKT
LSIAAQMKGKGRLLAMDVEQWKLDSLKQRARRANADNIETRIIASSKTIKRLKLSADRVL
LDVPCSGLGVLKRNPDAKWRDTPERLPVLVELQKHILQSYSRMVKVGGILVYATCSIMPE
ENRDQIDAFLAENKHFTFIEDENITVAESGFDGFYMAKLERIAE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcttaactctccgctttcccctagttcgaccgaattggttatcaatgtattagatatg
gtattaactgaagggaaacctttagatagagcctattctcaccacttctcgggcttacaa
ttagcgccatcagagcaggcacgcattactgtggttgcaggtgatttacttcgtcgttta
aacctttattgttatctgtcggatgtaaagtttgaagagatgtcgcgtatgggaacacgc
ttactgaatgtatggcatatgtttcacggactcgaggtacctaaaatgcaatatgcattg
caggtagatgaaaaaacgtattttgaacgtctagagaaggctaagactcagccagcttta
tgggatggttgccctgagtggttagaccaaatgggtcaggcacaactgggtgatgcttgg
gccacagagcgagcggcattgagtaaacagcctaaacgttttatccgcgtgaatttgctt
aaatgtacacgtgatgaattaggcaaaaaattacgtaatgagcaagtgcaaacccaggaa
gttgaaggtgttgaaaccgctcttgaagtcacatcagattcagcgctatttcgtaccgag
tcattcaagaagggctggttcgagcaacaggatgctggctctcagttggttgctgctgca
ctcgatgccaagccaggtatgcgtgttatcgacgcttgcgctggtgcgggcggtaagacg
ttatccattgcagctcaaatgaagggtaaaggtcgtcttttagctatggatgttgagcaa
tggaaacttgacagtcttaaacaacgtgctcgccgtgctaatgccgataacatagagacc
cgtattatcgccagctcgaaaaccattaagcgcctaaagctcagtgccgatcgtgtgttg
ttagatgtgccatgttcgggacttggggtacttaagcgcaatcctgatgcaaagtggcgt
gatacgcctgagcgcctgcctgtactggttgaactgcagaaacatatattgcagagttac
agccgcatggtgaaagtgggtgggatcttagtctacgcaacatgttctatcatgcctgaa
gagaaccgcgatcagattgatgcctttttggcagagaacaagcactttacattcattgaa
gatgaaaatataacggttgctgagtcaggatttgatggcttctatatggcaaagcttgag
cgaatcgctgaatag
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