KEGG   Shewanella eurypsychrophilus: FM038_013100
Entry
FM038_013100      CDS       T07746                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
seur  Shewanella eurypsychrophilus
Pathway
seur03030  DNA replication
seur03430  Mismatch repair
seur03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:seur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FM038_013100
   03430 Mismatch repair
    FM038_013100
   03440 Homologous recombination
    FM038_013100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seur03032]
    FM038_013100
   03400 DNA repair and recombination proteins [BR:seur03400]
    FM038_013100
Enzymes [BR:seur01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FM038_013100
DNA replication proteins [BR:seur03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FM038_013100
DNA repair and recombination proteins [BR:seur03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FM038_013100
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QPG58278
LinkDB
Position
3086266..3086883
AA seq 205 aa
MSTRAANSVIVLDFETTGLSPNQGDRAIEIGAVKLHDGVVIDTFQELMNPGFRVSGFIEG
YTGISNSMLANAASCETVMDSFADFIRDSNLVAHNASFDKRFLDAELDAISRTYDGEFAC
SMLIARRLYQEAPNHKLGGLVEYKQIENDGVFHRALADSEMTAKLWLTMLDDMQLAHHIS
LPSFKLMQDLSKTTKSQVKSFLSKT
NT seq 618 nt   +upstreamnt  +downstreamnt
atgagcactcgcgcagccaattcagttatcgttctcgatttcgaaaccacaggcctctcc
cctaaccaaggtgatcgagctattgaaatcggtgctgtaaaattacatgacggggttgtc
atcgacacgtttcaagaattgatgaatccagggtttagagtcagtggttttatcgaaggt
tatacggggatttctaacagtatgttagccaatgcagcctcttgcgagacagtgatggac
agctttgctgattttattcgtgatagcaacttagttgctcataatgcatcattcgacaag
cgcttccttgatgccgaattagatgccatcagccgtacctatgacggtgaatttgcttgc
tctatgttgatagcacgtcgtttatatcaagaagcgcccaatcataagctgggcggacta
gtagaatataagcagatagagaatgatggagtctttcaccgcgcgttagcggattcagaa
atgactgcaaagctttggcttaccatgctcgatgatatgcaattagcacatcatatcagc
ctacccagttttaagctgatgcaggacctatcaaaaacaaccaagtcgcaagtaaaatcc
tttctaagtaagacatag

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