Shewanella eurypsychrophilus: FM038_015110
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Entry
FM038_015110 CDS
T07746
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FM038_015110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
seur03000
]
FM038_015110
03400 DNA repair and recombination proteins [BR:
seur03400
]
FM038_015110
Enzymes [BR:
seur01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FM038_015110
Transcription factors [BR:
seur03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FM038_015110
DNA repair and recombination proteins [BR:
seur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FM038_015110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QPG58610
LinkDB
All DBs
Position
complement(3614120..3615655)
Genome browser
AA seq
511 aa
AA seq
DB search
MPNLMPKLSSESCRKARLSRDPRFDGKFFIGVLTTGIFCRPICPAVAPKEKNVRYFDSAV
SASIAGLRPCLRCRPDSAPQSSAWKGTQTTIERALSLIESGILSGSDAIGIEALVDKLGI
TSRYLRKLFTDNFGTSPKKYAQFRDLMFAKQLLHQTHLSITQVAFASGFNSVRRFNESFK
ETLKLTPSDLRKQSKSSVSQCGAPALEGIALSLFLAYRPPFNWAKQMAFYKVRMVESMEW
SKGEETYSRSFQIYQSKGYFEATHHKDRNGFKVNIHLSSSDDLASLKDIINQIRSVLDLD
ADMVQIEAVVSSVSSVSFVKDSIITGLRLPGTWSVFEAGCRAVLGQQVSIIQATQLLNKL
VNAYGETINVSGKCITLFPTPQVIANASLDELKMPGARKAALTALGQYVSENPDGNTEDW
LSIKGIGPWTVAYAKMRGLSDPNILLCSDLVVKKRVLKLYENQTLEVEPKINRENTQVAL
LDVDYQVLTQQLAKQVSPWGSYLTFQLWNLE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatcttatgcctaagttatcttctgaatcttgtagaaaggcgagactttctcga
gatcctcgctttgacggaaaattttttatcggagtattaacaacgggtattttttgtcga
ccaatttgtccagcagttgcacctaaagagaaaaatgtccgttatttcgactctgcggtg
agtgcttctattgcagggttaaggccttgtctacggtgtcggcctgatagtgcaccgcaa
tcgagtgcctggaaagggacgcaaacaaccatagagcgagcactgtctttgattgagtcc
ggcatattgtccggtagtgatgctatcggtatcgaggctcttgtagataaattagggatc
accagccgttacttaagaaaactgtttactgacaactttggtacctctcctaaaaaatat
gcgcagtttcgcgacttgatgtttgctaaacagttactgcaccaaacacacttaagtatc
acccaagtagcctttgcatcagggtttaacagtgttcgaaggtttaacgaatcctttaaa
gaaacactgaaactaacgccatcagatttacgtaaacagtctaagtcctcagtaagtcaa
tgtggggcaccggccctggagggcatcgctttatctctatttcttgcctatagaccccct
ttcaactgggccaagcagatggcattttataaagtgcgtatggttgaaagtatggagtgg
agtaagggtgaagaaacctatagcaggagctttcaaatttaccagtctaaggggtatttt
gaagccactcatcataaggatagaaatggctttaaggtaaatattcacttatcgtctagt
gatgatctagcctcacttaaagatatcattaatcagatccgtagcgtgttagatcttgat
gctgatatggttcaaatcgaagctgtggtttcatcggtttcatcggtttcatttgtaaaa
gatagcattatcacaggtcttaggttaccgggaacatggtcagtatttgaagccggttgc
cgagccgtactcgggcaacaagtcagtattattcaagcgactcaattattaaataaactt
gtgaatgcttatggcgaaacaattaatgtctctggcaagtgcatcaccttgttccctacg
ccccaagtgatagccaacgcgtcacttgatgagcttaaaatgcctggtgctagaaaagcg
gcattaacggcgttagggcagtatgttagcgaaaacccagatggaaacacagaggattgg
ttatctattaaagggatcggaccttggactgtggcttatgccaagatgagaggcttaagt
gatcccaatatcttgttatgctctgatcttgtagtgaaaaagcgtgtgcttaaactttat
gaaaaccaaacactggaagtggagcctaagatcaatagagaaaatacacaagttgctttg
ctcgatgtcgattaccaagtattgacacagcaattggccaaacaggtttccccatgggga
agctatctcacatttcaattatggaatttagaatga
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