Shewanella eurypsychrophilus: FM038_015475
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Entry
FM038_015475 CDS
T07746
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur00521
Streptomycin biosynthesis
seur00523
Polyketide sugar unit biosynthesis
seur00525
Acarbose and validamycin biosynthesis
seur00541
Biosynthesis of various nucleotide sugars
seur01100
Metabolic pathways
seur01110
Biosynthesis of secondary metabolites
seur01250
Biosynthesis of nucleotide sugars
Module
seur_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FM038_015475 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FM038_015475 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FM038_015475 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FM038_015475 (rfbB)
00525 Acarbose and validamycin biosynthesis
FM038_015475 (rfbB)
Enzymes [BR:
seur01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FM038_015475 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QPG58658
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Position
3690273..3691343
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AA seq
356 aa
AA seq
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MNIIVTGGAGFIGSAVIRHIINNTQDRVLNLDKLTYAGNLTSVASVSSSPRYQFVQADIC
DYQTVQKIFSDFQPDCIMHLAAESHVDRSIDGPAEFIQTNIVGTYNLLEVARHYWQQLES
DKKAAFRFHHISTDEVFGDLGDTGALFTEETPYAPSSPYSASKASSDHLVQAWHRTYGLP
IIMTNCSNNYGPFHFPEKLIPLVIINALHNKPLPIYGKGDQVRDWLYVEDHARALYSVLT
TGAVGQTYNIGGHNEKTNLEVVETICDVLQSLVGKPKEHAHYRELITFVDDRPGHDLRYA
IDASKIAADLNWLPTETFETGLEKTVQWYLDHQEWWQAIMDNTYAMDRLGLIKGKK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatagtaactggcggagccggatttatcggctctgcagtcattaggcatatt
atcaacaacactcaagacagggtgttgaatttagacaagctgacttacgccggaaaccta
acatctgttgctagtgttagttcatcaccacgataccaatttgttcaagccgatatctgt
gactaccaaactgtccaaaaaatatttagtgactttcaaccagattgtattatgcattta
gccgcagagagtcatgtggatcgctccatagatggacccgctgaatttatccagacaaat
attgttggtacctataatttgcttgaggtcgcccgtcactactggcagcagttagaaagt
gataaaaaagcagcatttagatttcaccatatttctacagatgaagtatttggtgactta
ggcgatacgggtgcgcttttcacagaagagaccccctatgcaccaagtagcccttattcg
gcgtcgaaagcctcatccgatcatttagttcaagcctggcaccgaacatatggcttaccg
attatcatgacaaactgctcaaacaactatggaccttttcatttccctgaaaaactcatt
cccttagttattatcaatgccctgcacaataagccgcttcctatctatggtaagggtgat
caggtacgtgattggctctatgttgaagaccatgccagagcgctctatagcgtgcttact
acaggagcggtaggacaaacgtacaacataggtggccataacgagaaaacgaacctggaa
gtcgttgaaactatttgtgatgtattacaatccttagtcggtaaacccaaagaacacgct
cactatcgagaactgatcacttttgttgatgaccgaccagggcatgacttacgttacgcc
atcgatgcgtctaaaatcgcagcagacctaaactggctaccaacagagacgttcgaaacg
gggctagaaaaaaccgttcaatggtatcttgatcaccaagaatggtggcaagctattatg
gacaacacatatgcaatggatcgcttaggtctgattaaaggcaaaaaatga
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