KEGG   Shewanella eurypsychrophilus: FM038_015475
Entry
FM038_015475      CDS       T07746                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
seur  Shewanella eurypsychrophilus
Pathway
seur00521  Streptomycin biosynthesis
seur00523  Polyketide sugar unit biosynthesis
seur00525  Acarbose and validamycin biosynthesis
seur00541  Biosynthesis of various nucleotide sugars
seur01100  Metabolic pathways
seur01110  Biosynthesis of secondary metabolites
seur01250  Biosynthesis of nucleotide sugars
Module
seur_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:seur00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    FM038_015475 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    FM038_015475 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    FM038_015475 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    FM038_015475 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    FM038_015475 (rfbB)
Enzymes [BR:seur01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     FM038_015475 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 RmlD_sub_bind 3Beta_HSD NAD_binding_4 adh_short KR
Other DBs
NCBI-ProteinID: QPG58658
LinkDB
Position
3690273..3691343
AA seq 356 aa
MNIIVTGGAGFIGSAVIRHIINNTQDRVLNLDKLTYAGNLTSVASVSSSPRYQFVQADIC
DYQTVQKIFSDFQPDCIMHLAAESHVDRSIDGPAEFIQTNIVGTYNLLEVARHYWQQLES
DKKAAFRFHHISTDEVFGDLGDTGALFTEETPYAPSSPYSASKASSDHLVQAWHRTYGLP
IIMTNCSNNYGPFHFPEKLIPLVIINALHNKPLPIYGKGDQVRDWLYVEDHARALYSVLT
TGAVGQTYNIGGHNEKTNLEVVETICDVLQSLVGKPKEHAHYRELITFVDDRPGHDLRYA
IDASKIAADLNWLPTETFETGLEKTVQWYLDHQEWWQAIMDNTYAMDRLGLIKGKK
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgaacatcatagtaactggcggagccggatttatcggctctgcagtcattaggcatatt
atcaacaacactcaagacagggtgttgaatttagacaagctgacttacgccggaaaccta
acatctgttgctagtgttagttcatcaccacgataccaatttgttcaagccgatatctgt
gactaccaaactgtccaaaaaatatttagtgactttcaaccagattgtattatgcattta
gccgcagagagtcatgtggatcgctccatagatggacccgctgaatttatccagacaaat
attgttggtacctataatttgcttgaggtcgcccgtcactactggcagcagttagaaagt
gataaaaaagcagcatttagatttcaccatatttctacagatgaagtatttggtgactta
ggcgatacgggtgcgcttttcacagaagagaccccctatgcaccaagtagcccttattcg
gcgtcgaaagcctcatccgatcatttagttcaagcctggcaccgaacatatggcttaccg
attatcatgacaaactgctcaaacaactatggaccttttcatttccctgaaaaactcatt
cccttagttattatcaatgccctgcacaataagccgcttcctatctatggtaagggtgat
caggtacgtgattggctctatgttgaagaccatgccagagcgctctatagcgtgcttact
acaggagcggtaggacaaacgtacaacataggtggccataacgagaaaacgaacctggaa
gtcgttgaaactatttgtgatgtattacaatccttagtcggtaaacccaaagaacacgct
cactatcgagaactgatcacttttgttgatgaccgaccagggcatgacttacgttacgcc
atcgatgcgtctaaaatcgcagcagacctaaactggctaccaacagagacgttcgaaacg
gggctagaaaaaaccgttcaatggtatcttgatcaccaagaatggtggcaagctattatg
gacaacacatatgcaatggatcgcttaggtctgattaaaggcaaaaaatga

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