Shewanella eurypsychrophilus: FM038_016135
Help
Entry
FM038_016135 CDS
T07746
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FM038_016135 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seur03400
]
FM038_016135 (xseA)
Enzymes [BR:
seur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FM038_016135 (xseA)
DNA repair and recombination proteins [BR:
seur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FM038_016135 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QPG58777
UniProt:
A0ABX6V8M1
LinkDB
All DBs
Position
3837192..3838520
Genome browser
AA seq
442 aa
AA seq
DB search
MKTPKNNVYTVSRLNGEVRQLLEGELGKIWLNAEVSNFAAPASGHWYLTLKDNNAQIRSA
MFKGRNRSVAFKPVNGQQVLVKGSISVYEPRGDYQLILESMMPAGDGLLAQQYEALKMKL
AAEGLFAAETKRPIPSNIQKIGVITSATGAALKDVLHVLARRDPSIEVVVYPTQVQGKDA
DKLICKAIEIANARLEVDVLLLTRGGGSLEDLWCFNSEDLAHSIYNSALPIVSAVGHEVD
TTICDYVADVRAPTPSSGAELLSKDAENKHEKLELFVSRLKQSWQHYQLKTNSRMSTLTH
RLQRQDPKRRLEQYEQSFDEMQFRLDAAIDKKLANLALKQQQLSHRLNQQSPKNKLSLEA
QRLSYLTSRLKDSIKEKLNSSEKSLSVSAHQLQTVSPLATLSRGYSITQDAKGKVLTRSE
DINIGDVLTTKLLEGEIQSKVV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaccaaaaaataatgtttacaccgtttctcgtctcaacggtgaagtgcgtcaa
ttactcgaaggtgagctaggcaagatctggcttaatgcagaagtatcgaactttgccgct
ccggcttctggccactggtatctcactcttaaagataataatgcccagatccgttcagcc
atgtttaaaggtcgcaatcgcagtgtcgcctttaaacccgttaatgggcagcaggtatta
gttaagggctctatcagcgtctatgagccacgaggggactatcagctgatcttagagtca
atgatgccagccggtgatggtttgttagcccagcaatatgaagcgctaaaaatgaaactg
gctgcagaaggcttgtttgcagccgaaactaagcgccctattccgtccaacattcaaaaa
attggtgttatcacctcagcaacaggcgcagcgctcaaagatgtactacatgtgctcgct
agacgcgatccttccattgaagtggtggtttatcccactcaagtgcaaggtaaggatgcc
gataagctcatctgtaaagcgatagagatagccaatgcaagattagaggtcgatgtattg
ctgctcactcgaggcggcggctcactggaagacttatggtgttttaacagcgaagatctc
gctcatagcatctataacagcgccctgcctatcgtttctgctgttggccatgaagtcgat
accaccatctgtgattatgtcgccgatgtacgcgcgccaaccccctcatcgggcgcagag
ctactatcaaaagatgctgaaaacaaacatgaaaagctcgaactatttgtttcaaggcta
aaacaaagttggcagcattatcagctaaaaaccaatagccgaatgagcacactgactcac
aggttacagcgccaagatcctaaacgccgtctcgagcaatatgagcaaagcttcgatgag
atgcaatttagactcgatgctgccatcgacaaaaaactcgcaaacttggcattgaagcag
caacaactgagtcatcgtctaaaccaacaatcaccaaaaaataaactctctttggaagcg
cagagactcagttatttaacctcacggctgaaagactccatcaaagagaaactgaacagc
agcgaaaagagcctcagcgtcagtgcccatcagttacagacagtgagcccgttagccact
ttaagccgtggctacagcattacccaagatgctaaggggaaagtgctgactcgttctgag
gacatcaatattggcgacgtactgacaactaagctgttagaaggcgaaattcaatctaaa
gtggtataa
DBGET
integrated database retrieval system
