Shewanella eurypsychrophilus: FM038_017880
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Entry
FM038_017880 CDS
T07746
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seur03016
]
FM038_017880
Enzymes [BR:
seur01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FM038_017880
Transfer RNA biogenesis [BR:
seur03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FM038_017880
Prokaryotic type
FM038_017880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QPG59063
LinkDB
All DBs
Position
complement(4213453..4214520)
Genome browser
AA seq
355 aa
AA seq
DB search
MIELHYLHGKPASKADLRTNNSDFIVQEILPFGPTGEGEHHLLHIRKEGLNTADVAKILS
GFAHVHPKEVTYAGQKDKNAITEQWFGVRIPGKETPEWSSLNNEELTVLSSHRHGKKLRI
GALAGNRFTLTLRNLTDMDDVLARLALIKETGVPNYFGEQRFGHDGKNLIFGRQMFTGRK
VKDRKKRSMYLSAVRSYLFNYVTSARLAKHGLAKLDGDSVLLAGSRSYFVAEKWDAELLK
RLDEKDIQLSAPMWGRGSILPQGEAADFENLALSEFELDRDGLEHAGLDQERRPLLLEPQ
HLTYQQEGEDVIVLKFALPSGSFATSVLRELFDYEDVKDREFRQRQQERREQEQN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttcattatttacacggtaagccagcttcaaaggctgatcttcgtacaaac
aatagtgactttattgttcaggagatattacccttcggccccactggagagggggagcat
catctgctgcatatccgcaaagaggggctgaacaccgctgatgtcgctaagatattgtct
ggttttgctcatgttcatcctaaagaggtgacttatgctggccaaaaagataaaaatgcc
attaccgagcagtggtttggtgtacgtattccgggaaaagaaacgccagaatggtccagt
ttaaacaatgaagagctaacggtattatctagtcatcgtcacggtaaaaaactaagaatt
ggtgccttagcgggtaaccgatttacgctcacgttacgaaatcttaccgatatggatgat
gtattggctcggttagctctcatcaaggagactggagtacctaactactttggtgagcaa
agatttggtcatgatggtaagaatttaatctttggcagacagatgtttactggtcgtaag
gtgaaagatagaaagaaacgcagtatgtacctatctgctgtccgctcttatctatttaat
tacgtcacttctgctagattagcaaaacatgggctagcaaagttggacggtgacagtgtt
ttattagctggaagtcgcagctattttgtcgctgaaaaatgggatgcagagctgcttaag
cgtctggatgaaaaagatattcaactctctgcacctatgtggggcagaggcagcatatta
cctcaaggtgaagctgccgattttgagaatttagcactttcagagtttgaacttgatcgt
gatgggctagaacatgcagggcttgatcaagaacgtcgtcctttgctgcttgaaccacag
catcttacttatcaacaagaaggcgaagatgtcatcgtgttaaagtttgcgctaccctca
ggaagctttgcaacatctgtgctgcgtgaattgttcgattatgaggatgttaaagaccgc
gagtttcgccagcggcagcaagagaggcgtgaacaagagcaaaactag
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