Shewanella eurypsychrophilus: FM038_018430
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Entry
FM038_018430 CDS
T07746
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seur03400
]
FM038_018430 (radA)
DNA repair and recombination proteins [BR:
seur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FM038_018430 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
AAA_22
Lon_C
GvpD_P-loop
SLFN-g3_helicase
nSTAND3
AAA_14
CobU
NPHP3_N
Rad51
AAA_18
RecA_N
AAA_16
cobW
ABC_tran
AAA
NACHT
AAA_30
AAA_11
AAA_19
MMR_HSR1
DZR
NTPase_1
RNA_helicase
TsaE
ATPase_2
AAA_28
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QPG59155
UniProt:
A0ABX6VFI1
LinkDB
All DBs
Position
complement(4345240..4346613)
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AA seq
457 aa
AA seq
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MAKIKKAFVCNECGQDFPRWQGQCSACQEWNTITEVRLSASKSVGTSVSGYAGAVGGGSK
KLSEIKEFEAEKMLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTLLSDLVSRMSQSMP
SLYCTAEESLSQFKNRVNRLKLDCNEDNLFLMAETSVEAIIAELDAKQVKFAVIDSIQAV
VTELANGSPGSPSQVKSSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH
LECNDGQIRTLRANKNRFGDVDTVGIFRMTERGMLSVDNPSEIFLSGSSTESPGAAITCI
RKGNRNLLIEIQCLTTETEGEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTYFNLVG
GLKIDESETCIDLALVAALLSSLNDFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAVQH
GFTEILIPFRNYHKSMEGLGAKINPVRTIHELLELIN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaattaaaaaagcgtttgtatgtaatgagtgtggacaagatttcccacgttgg
caggggcaatgcagtgcatgtcaggaatggaataccattactgaagtgcgcttaagtgcc
agcaagtctgtaggcacttcagtatcgggttatgctggcgctgtcggcggtggttcaaaa
aaactcagtgaaataaaagagtttgaagccgagaaaatgttaaccggcataggtgaactc
gatcgcgtactttgtggcggcttaaccacaggctctgtcaatatcatttctggtgatcct
ggtgctggtaagacaaccttattatcggatttagtctcgcgtatgtcgcagagcatgcca
tcactctactgtactgcagaggagtcattgtcgcagtttaagaaccgtgtgaatcggctt
aaattggactgcaacgaagataacttatttctaatggctgaaaccagcgtcgaagctatc
attgcagagcttgatgctaagcaagtgaagtttgccgttatcgattcgatacaggctgtg
gtgactgagctggcgaatggcagcccaggttcgccatcacaagtgaagagtagtgctcag
gctttaacgcagtactgcaagcaaaataatgtgactatgtttctagtggctcatgttaat
aaaaacaatgaaacagccggcccacagacattaatccatattgttgattgtctgacccat
cttgagtgtaacgatggacagattcgaacactcagagccaataaaaaccgttttggtgat
gtcgataccgttggcatttttagaatgacagagcggggcatgcttagtgttgataatccc
agcgaaatatttttgtctggctcatcgaccgagtcccctggggctgcaattacctgtatt
cgaaaaggtaatcgcaatttattaattgagatccagtgtttaaccactgaaaccgaaggt
gagtttccacaacgtgtgtgtgtgggccttaatatgaaccgcattaaaatgttgacggga
atattacgtaaacataccaaaaccaaaatttttcatgatacttatttcaacttagtcggc
ggtttgaaaattgatgaatctgaaacctgtatcgacttagcgttagtggcagcattatta
agcagtttaaacgatttcgtggtgccaagaaccacctgcatcatgggcgaactcagctta
aatggtgacgtgcgtccgatagacagcggtgttccacgggtcaaagaagcggttcaacac
ggatttactgaaatcttgatcccgtttagaaattatcacaagtcgatggaagggctcgga
gctaagatcaatccggtaaggactatccatgagttgcttgagttaataaattaa
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