Shewanella eurypsychrophilus: FM038_018530
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Entry
FM038_018530 CDS
T07746
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seur03021
]
FM038_018530 (nusA)
03009 Ribosome biogenesis [BR:
seur03009
]
FM038_018530 (nusA)
Transcription machinery [BR:
seur03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FM038_018530 (nusA)
Ribosome biogenesis [BR:
seur03009
]
Prokaryotic type
rRNA transcription factors
FM038_018530 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
DUF2187
S1
KH_KhpA-B
Glyoxalase_4
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QPG59175
LinkDB
All DBs
Position
complement(4372904..4374403)
Genome browser
AA seq
499 aa
AA seq
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MNKEILLVAEAVSNEKGVPREKIFEALEIALATATKKKHEGEIEVRVEIDRKTGGYETFR
RWMVVEDTGEPLENPYGEITLEAAQYEDPEIQLGDYIEDDMESVTFDRITTQTAKQVIVQ
KVREAERAQVVEQFQDKEGELITGVVKKSNRESVVVDLGSNADAVLFKEDLIARENFRPG
DRVRAFLFSVRPEARGAQLFLSRTRPEMLIELFRVEVPEIADEMIEIMGAARDPGSRAKI
AVKSNDKRIDPIGACVGMRGARVQAVSNELNGERVDIVLWDDNPAQYVINCMAPADVASI
IVDEDTHSMDIAVEADSLAQAIGRNGQNVRLATQLSGWELNVMTVADMQAKHQAESAKVV
SLFVEYLDIDEDFAQILADEGFTSLEEVAYVPAAELMDIDGFDEDTVEALRERAKAAIST
RALATEEALDGAEPSEDLLALEGLERHLAFVFASKGVITLEDLAEQGIDDLIDIEELTED
KAGELIMAARNICWFGDEE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctagtcgctgaggcggtttcaaatgagaaaggcgttcctcgc
gaaaagattttcgaagcgctggaaattgctttagctacggctacaaagaagaaacacgaa
ggtgagatcgaagttcgtgtcgaaatcgatcgtaaaaccggcgggtatgaaactttccgt
cgctggatggttgttgaagacacaggtgaaccattagaaaatccttatggcgaaataacg
ctagaggctgctcagtacgaagatcctgaaatccagcttggcgattatatcgaagatgat
atggagtctgttacttttgaccgtattacgactcaaactgctaagcaggtgatcgttcaa
aaggtaagagaagccgagcgtgctcaagttgttgagcagtttcaggataaagaaggcgag
ttaatcactggcgtagtcaagaaaagcaaccgtgaaagcgttgttgtcgatcttggtagt
aatgctgatgcggttctatttaaagaagacctcattgcgcgtgaaaacttccgcccaggt
gatcgtgttcgtgcttttctattttcagtacgtccagaagcacgtggtgctcagcttttc
ttatctcgtactagacctgaaatgcttattgagcttttccgtgttgaagtaccggagatt
gctgatgagatgattgagatcatgggcgcagctcgtgacccaggctctcgcgctaagatt
gctgttaagtcaaacgacaagcgaattgatccaattggtgcttgtgttggtatgcgtggt
gcacgtgtacaggctgtttctaatgaacttaatggcgagcgtgttgatatcgtgctttgg
gacgataacccagcgcaatacgttattaactgtatggccccagctgatgttgcttctatc
atcgttgatgaagatacccactcaatggatatcgctgtcgaagccgacagtttagctcaa
gctattggccgtaatggacagaacgttcgtttggccacccagttatctggttgggaactg
aatgtgatgacggttgcagatatgcaggctaagcatcaggctgaaagtgcaaaagttgtg
agtctattcgttgaatatctagatatcgacgaagatttcgctcaaattctggccgatgaa
gggtttacatcgctagaagaagttgcttatgttccggcagctgaattgatggacatagat
ggtttcgatgaagataccgtcgaagcattgagagagcgtgctaaagcggctatctcgacc
agagcgttagcaacggaagaagcacttgacggtgcagagccgagtgaagacttgcttgct
ctagaaggccttgaaagacatttggctttcgttttcgctagcaaaggcgtaatcacactt
gaagatctggccgaacaaggcatagatgatttgatagatattgaagaattgacagaagat
aaagctggtgagctcatcatggcagcccgcaatatctgttggtttggcgacgaagaataa
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