Shewanella eurypsychrophilus: FM038_018970
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Entry
FM038_018970 CDS
T07746
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur03030
DNA replication
seur03430
Mismatch repair
seur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FM038_018970 (holA)
03430 Mismatch repair
FM038_018970 (holA)
03440 Homologous recombination
FM038_018970 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seur03032
]
FM038_018970 (holA)
03400 DNA repair and recombination proteins [BR:
seur03400
]
FM038_018970 (holA)
Enzymes [BR:
seur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FM038_018970 (holA)
DNA replication proteins [BR:
seur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FM038_018970 (holA)
DNA repair and recombination proteins [BR:
seur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FM038_018970 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DUF4388
ORC-CDC6-like
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QPG59237
LinkDB
All DBs
Position
4459046..4460086
Genome browser
AA seq
346 aa
AA seq
DB search
MRVYQDQLSKQLSPLKQCYMIFGDDPWLCETSRSQILKHAKKQGFDEKIQLIQETGFNWN
SLIDEWQAMSLFSSRRVIELTLPQAKPGAEGGAIFQSLMKMANPDVLLIITGPKLAAEQT
KSKWFKTLDNHGVYIPCATPEGQQFQRWLDTRIQHFDLTLSRDAKEMLFSLYEGNLLAAD
QSLQLLQLLSPNQQISSQELTRYFEDQSRFNVFQLTDAMLNNQQDNAQHILSQLKAEGVA
MPILLWGIFKELGILLQLKSALESQQSLQSLWGKLRIWDKRKPLYQAALNRLTLTQIESL
LASASELELNLKQQGIEDWTGLSHLSLLFDPKAHLALSHIKLNHWN
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtctatcaagatcaactctctaaacagctttcaccactgaagcagtgctatatg
atcttcggtgatgatccttggctatgtgaaaccagccgcagtcagatcctcaagcatgct
aagaaacaaggcttcgacgaaaaaatacagttaatccaggaaactggcttcaactggaat
tcactcattgatgaatggcaggcaatgagtttattttcaagccgaagagtgattgaatta
actttacctcaggcaaagcctggagccgaaggtggcgccatatttcaaagcttgatgaaa
atggccaatccagatgtgctattaatcatcacagggccaaaactcgccgcagaacagaca
aagagtaagtggtttaaaaccttagataaccatggcgtttacattccttgtgctacacca
gagggccaacaatttcaacgctggctagatacccgtattcagcactttgatttgacgcta
agccgagatgctaaagagatgctattcagcctctatgaggggaacttactcgcggcggat
caatctctacaactgctccaactcttgagccctaaccagcagataagtagccaagaattg
acacgttactttgaagatcagtctcgctttaatgtgtttcagctaaccgatgcgatgctg
aataaccaacaagataatgcgcagcatattctgtcacagttaaaagccgaaggcgttgct
atgcccattttgctgtgggggatctttaaagagctaggtattttactgcaattgaaatca
gcccttgagtctcaacaatctctgcaatcactttgggggaaattaaggatttgggataaa
cgtaagccactttatcaagcagccttaaatcgccttacgttaacgcaaatagaaagctta
cttgctagcgcctctgaattagagctcaatctcaaacagcaaggtatcgaagattggacg
ggattgagtcacttaagcttactttttgatcctaaagcacatttagccctgtctcatata
aaacttaaccattggaactaa
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