Shewanella eurypsychrophilus: FM038_019960
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Entry
FM038_019960 CDS
T07746
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FM038_019960 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seur03400
]
FM038_019960 (ung)
Enzymes [BR:
seur01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FM038_019960 (ung)
DNA repair and recombination proteins [BR:
seur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FM038_019960 (ung)
Prokaryotic type
FM038_019960 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QPG59405
LinkDB
All DBs
Position
complement(4688145..4688813)
Genome browser
AA seq
222 aa
AA seq
DB search
MALHTDWNTFIDAEKRLAYYQKLASFVQAECDSGKAIFPPQEEVFTAFDKTPLDKVRVVI
IGQDPYHGPNQAHGLCFSVKHGVKTPPSLVNMYKELVTDIPGFKTPEHGHLSSWAEQGIL
MLNTVLTVEQAKAHSHAKSGWETFTSNALKLLNEQKKPIIFILWGAHAMKKGKVITAKQH
HILSGPHPSPLSAYRGFFGCQHFSKTNEILTSLGTKPIDWQV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggctttacacacagattggaacacctttatagacgcagagaaaaggttagcctattac
caaaaattagcgtcatttgttcaagctgaatgcgacagtggcaaggcgatattcccgcca
caagaggaagtgtttaccgcattcgataaaaccccgctagataaggtacgcgtggtgatc
ataggccaagatccgtaccatggaccgaatcaagctcatggcctctgcttttcggtgaag
cacggggtgaaaacgccaccttctttggtcaatatgtataaagagctagtgacggatata
cctggatttaaaacccctgaacacggccacctttcaagctgggctgagcaagggatcttg
atgttaaatacagtgcttaccgttgaacaagctaaggcgcattcccatgctaaatcgggc
tgggaaacctttacctctaatgcgcttaaactgcttaatgagcaaaaaaaaccgattatc
tttatcttgtggggcgctcatgcgatgaaaaaaggcaaggtgatcaccgccaaacagcat
catattttgtcgggtcctcatccctcgccattatcggcttaccgaggcttcttcggttgc
cagcatttctcaaaaaccaatgagattttaacttcgctaggcactaagccgattgattgg
caggtttaa
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