Shewanella eurypsychrophilus: FM038_020720
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Entry
FM038_020720 CDS
T07746
Name
(GenBank) LuxR C-terminal-related transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
seur03000
]
FM038_020720
Transcription factors [BR:
seur03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
FM038_020720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
HTH_40
TetR_C_26
Sigma70_ECF
HTH_24
Sigma70_r4
HTH_38
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QPG59532
UniProt:
A0ABX6VCA1
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All DBs
Position
4863925..4864557
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AA seq
210 aa
AA seq
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MYDGEIFTINGNSSNFITAKSAAGLLNLSLNKDKNLVRAWLNTTSNTKILLHFIDCMQSY
LQLVEYDLFKSGTHIAICSTLTIEDELLLIEHGFNAALLSNESPYTLIKKMTTVIDGNLC
FSNEACSRFILNTNRSPLNKDRLTLIFSTTKKEKEVISLVCSGMSNEQVANKLNVSINTI
KMHLQNIYKKAQIKNRGQLLLTYGQNFVAH
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatggcgaaatattcactatcaatggaaactctagtaactttataaccgcaaaa
agtgctgcaggcctgctaaacctaagcttaaacaaggataaaaatcttgttcgggcatgg
ttaaacacgacttcaaatacaaaaatattactgcacttcattgactgcatgcagagctat
ctgcaactggtcgaatatgacttatttaaatctgggactcatatagcaatctgctcaacg
ttaaccattgaggatgagttattactcatagagcatggtttcaatgctgcattgctttca
aatgagagcccttacactctgataaaaaaaatgaccactgtaattgatggcaatttatgt
tttagtaatgaagcatgttcacggttcatattaaatacaaacagaagccctttaaacaaa
gatagactgactcttatattttcaacaacgaagaaagaaaaagaagtcattagcctagtt
tgcagtggcatgagtaatgagcaagtagccaacaaactcaatgtgtcgataaacacaata
aaaatgcatttgcaaaacatttataaaaaggcacaaattaagaatagaggacagcttctt
ctgacttatggtcaaaattttgtagcacattaa
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