Shewanella eurypsychrophilus: FM038_022665
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Entry
FM038_022665 CDS
T07746
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FM038_022665 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seur03400
]
FM038_022665 (priA)
Enzymes [BR:
seur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FM038_022665 (priA)
DNA repair and recombination proteins [BR:
seur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FM038_022665 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
ResIII
Zn_ribbon_PriA
PriA-like_WH
AAA_30
TrwB_AAD_bind
Zn_ribbon_6
AAA_19
Thymidylate_kin
DUF5816
Motif
Other DBs
NCBI-ProteinID:
QPG59857
LinkDB
All DBs
Position
5304366..5306561
Genome browser
AA seq
731 aa
AA seq
DB search
MPLFVEVALPVPMRQTFSYKVPESVTCLPQKGMRVKVPFGRQQLIGLVTQTTDTCNLAAN
KIKSIIELLDDEPLLPDSLYKLTAWAARYYFCSLGQMLSQALPVALRKGAEVSADTTTFW
SLTSAGREACLDTLKRAHAQKKVMEYLQKGEMTQDELNSLALSKSAIKALQDKDWIEKHD
RINQIDLSWRDELTLGEDPLTLNPEQAIAVATLNQQKGYHCTLLEGITGSGKTEVYLALL
ESVLKQGKQALILVPEIGLTPQTISRFKSRFNVQVAVIHSGLTDNQRLSAWQKAKTGEAA
IIIGTRSALFTPMAYPGTIILDEEHDSSFKQQEGIGYHARDLAVMRGHLEQIPVLLGTAT
PSLESLQNALSGRYKHLELGQRAGNAEKVRQGIIDISNQPLKTGLSHALINEIRIHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNHYAIPRQCHS
CGSTMLMGQGVGTEQLADALEKEFPKYPVVRIDRDTTSRKGALEAHLNAIHKGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRARKPGTVLMQT
HQANNAVLRELMHKGYGEFARGQLNERKQALLPPAWHMLLIRAEAHQAIDADNFLSQVAE
LLPQNEVCEVIGPMPAPMDKKAGKYRRHLIFQTKTRALLQQAFEQAQPQIEALPLAKRCK
WSLDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtttgttgaagttgccctcccagtccctatgcggcagaccttcagttataaa
gtacctgaatctgtcacttgcttgcctcagaagggcatgagagtcaaagtccctttcggc
cgccagcaattgattggcctagttacacaaacaacggatacatgtaacttagcagcaaat
aagattaaatctatcattgaactgttagatgatgaacctttactgcctgattcactttat
aaacttacagcatgggccgctaggtattacttttgtagtctggggcaaatgctatctcaa
gccctccctgtcgcgttacgtaaaggcgcggaagtttccgccgacaccaccaccttttgg
tcactaacctccgcaggtagagaagcttgtctcgatacactcaagcgagcacatgcccaa
aaaaaggtcatggaatatttacaaaaaggtgaaatgacccaagatgaactcaacagctta
gccttgagtaaatctgcaataaaggcactacaggataaagattggattgagaaacatgat
cgaattaatcaaatagatctcagttggcgcgatgagctaacgctaggagaagatccgtta
acgctcaaccctgaacaggccattgccgttgcgacactaaaccaacaaaagggttaccac
tgtacgctactcgaaggcattacaggttccggtaaaactgaagtttacctcgcattactt
gaatctgtgctcaaacaaggaaagcaggcgctaatcttagtgcctgaaatcggcttaaca
ccgcaaactatcagccgatttaagagccgtttcaatgttcaagtcgctgtgatccattca
ggcttaacagacaatcaaaggctttcggcctggcaaaaggctaaaaccggtgaagcagcc
ataatcataggcacgcgttctgcacttttcaccccaatggcttatcctggcaccatcatt
ttagatgaagaacatgattctagttttaaacagcaagaaggcataggctatcacgccaga
gatcttgcggtcatgcgaggtcatttagaacaaatacccgttttactgggcactgcgaca
ccttcactggaaagcctacaaaatgccctcagtggtcgttacaagcacctcgaattaggc
caacgtgccggtaatgcagaaaaagtacgccaaggcattattgacatcagtaaccagcca
cttaaaacaggcttgtcacacgcgttaattaatgaaatacgtattcacttagatgcaggc
aatcaggtactcctattcctcaaccgaagaggctttgcccccgcattgctgtgccatgaa
tgtggccatctgcacgaatgtgatcgctgcgatgccttttttaccgtgcatcagtctttg
ggagagatccgctgtcatcactgtggtaaccattacgccattcctcgtcaatgccatagc
tgtggcagcaccatgctgatgggacaaggcgtcggcacagagcaacttgccgatgcatta
gaaaaagagttccctaaatacccagttgtgcgtatcgatcgtgacacaactagccgcaaa
ggcgcgctggaagctcatctcaatgcgattcataagggcgaatataagattttagtcggc
actcagatgcttgccaaagggcatcattttcccgatgtgaccttagtagggttattagat
gtcgatggtgcactctttagtgcggacttccgggcaccggagcgatttggacagctctat
acccaagtatcgggtcgagccggccgcgctagaaaaccaggcaccgttttaatgcagacc
catcaagcgaataatgccgttttgcgtgagttaatgcataaaggttatggtgaatttgct
cgcgggcaactcaatgagcgcaaacaagccttgctgccgccggcgtggcacatgttactc
atacgcgctgaagctcaccaagccatagatgccgataattttctatctcaagttgccgag
ctattaccgcagaatgaagtctgtgaagtgataggccccatgcctgcgcctatggacaag
aaagcgggaaagtatcgtcgacacttgatattccagaccaaaacaagagcacttctacaa
caagccttcgaacaggcacagccccaaatagaagccttgcctctggctaagcgatgtaaa
tggagcctagatagggatcctcaagatctgctttaa
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