Shewanella eurypsychrophilus: FM038_023305
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Entry
FM038_023305 CDS
T07746
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FM038_023305 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
seur01007
]
FM038_023305 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seur03016
]
FM038_023305 (trpS)
Enzymes [BR:
seur01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
FM038_023305 (trpS)
Amino acid related enzymes [BR:
seur01007
]
Aminoacyl-tRNA synthetase
Class I (G)
FM038_023305 (trpS)
Transfer RNA biogenesis [BR:
seur03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FM038_023305 (trpS)
Prokaryotic type
FM038_023305 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QPG59959
UniProt:
A0ABX6VC99
LinkDB
All DBs
Position
complement(5444475..5445482)
Genome browser
AA seq
335 aa
AA seq
DB search
MTNPAKPIVLSGAQPSGELTIGNYMGALRQWVALQDSHDCLYCVVDLHAITVRQDPKALR
EACLDTLALYLACGVDPKKSTVFIQSQVPQHTQLGWALNCYTQMGELNRMTQFKDKSQKH
ASNINVGLFAYPVLMAADILLYQANEIPVGQDQKQHLELTRDIATRFNNAYGDTFAIPEP
FIPELGAKVMSLQDPLKKMSKSDDNRNNVIGLLEDPKKIMKKIKKAMTDCDEPPVVRFDT
ENKPGVSNLLSLMSGVSGKSIAGLEAEFEGKMYGHLKAATGEAVVAMIEPLQARYREFRE
DTTFLHQVMKDGAEKAQARAEVTVKKVYEKIGLIV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccccgcaaaacccatagtactaagcggcgcacagccgtcaggtgagctgacc
attggcaactacatgggcgcattgagacagtgggtcgctctgcaagatagtcatgattgt
ctttattgtgtcgttgacctccatgccatcacagtgaggcaagatcctaaagcgctaaga
gaagcctgtctggataccttggccctataccttgcttgtggcgtcgatcctaagaagagt
accgtttttatccagtctcaggttcctcagcatactcagttaggttgggcactgaattgt
tatacccagatgggtgaactgaatcgtatgactcagttcaaagataagtcgcagaagcat
gccagcaacattaatgtgggtctgtttgcttacccagtattgatggcggccgatatttta
ttgtatcaagccaatgagatccctgtgggccaagatcagaagcaacacctagagttaact
cgcgatattgcaacgcgctttaataatgcatatggtgacactttcgctatccctgagcca
ttcatcccagagctaggtgctaaggtgatgtcgctgcaagatccgcttaagaagatgtct
aagtctgatgataatcgtaataatgttatcggcttacttgaagatcctaaaaagatcatg
aagaaaattaagaaggcaatgacagattgcgatgagccaccagttgtgcgtttcgataca
gaaaacaagccaggtgtatctaacttgcttagcttaatgtctggcgtatcaggcaagagt
attgctgggttagaggctgagtttgaaggtaagatgtatggtcatttaaaagcggcaacc
ggtgaagccgttgttgcgatgattgaaccgttacaagctcgataccgcgaattcagagaa
gacaccacattcttgcatcaagtgatgaaagatggagcagagaaagctcaagctcgcgcc
gaagttaccgtgaaaaaagtttacgaaaaaattggcttgattgtgtaa
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