Shewanella eurypsychrophilus: FM038_024180
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Entry
FM038_024180 CDS
T07746
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
seur
Shewanella eurypsychrophilus
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seur03016
]
FM038_024180 (trmA)
Enzymes [BR:
seur01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
FM038_024180 (trmA)
Transfer RNA biogenesis [BR:
seur03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
FM038_024180 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_15
Methyltransf_25
MTS
Methyltransf_31
TRM5-TYW2_MTfase
Cons_hypoth95
PrmA
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QPG60101
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Position
5621374..5622471
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AA seq
365 aa
AA seq
DB search
MNLAAMDPTTYDAQLEEKRIKLEQIFTDFDTPKLEVFSSEPAHYRMRSEFRIWHDGDDMY
YYMFDKALDSKVRCDQFLPASRLINEMMPELIAELKPNTLLRHRLFQIDFLSTHSGEILV
SLLYHKQLDQQWEVEAKALKDKLAAKFNVNLIGRARKQKLIFDKDFVIETLTVNDKELHY
HQIENSFTQPNGKVSVKMLEWAIDVTKNSTGDLLELYCGNGNFSIALAQNFDRVLATELA
KPSVQSAQFNIDINKVDNLQIIRMSAEDFTDAMAKKRSFRRLEGIDLDSYNCNTIFVDPP
RAGMDSNTVKLVQGYERIIYISCNPNTLMDNLQELTKTHKITRFALFDQFPYTDHMESGV
FLERK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagcggcaatggatcctacgacctatgatgcgcaattagaagagaagcgcatc
aagctggaacagattttcacagacttcgatacaccaaagttagaagttttcagctcagag
ccagctcattaccgtatgcgttcagaatttcgtatttggcatgatggtgatgacatgtat
tactacatgttcgataaagcattagacagtaaagttcgctgtgaccaatttttgcctgcc
agtcgtcttatcaatgagatgatgcctgagcttattgcggaactaaaacctaatactctg
ttgagacatagattgtttcaaatcgatttcctttcgacacacagtggtgagatccttgtt
tcattgctgtaccacaagcaattagatcagcagtgggaagtcgaagcgaaagccctaaaa
gataagttagccgctaaatttaacgttaacttgattggcagagcacgcaaacaaaagttg
atttttgataaagattttgtgattgaaaccctgacagttaatgataaagagctgcactat
catcaaattgaaaatagcttcactcagcctaatggcaaagtctcagtcaaaatgcttgaa
tgggcgatagacgttactaaaaacagcactggcgatctcttggagctttactgtggtaac
ggaaacttctctatagcactcgctcaaaactttgatcgagtcttagcaactgaacttgca
aaaccttcagtacagtctgctcagttcaacattgatataaacaaagtagataacttacaa
atcatccgcatgtctgctgaagacttcaccgatgcaatggctaaaaagcgtagctttaga
cgattagaaggtattgatttagacagttataactgtaataccatttttgtcgatccacca
cgagcaggtatggattcaaacactgtaaagttagtccaaggttatgagcgtattatttac
atctcttgtaatccaaataccttaatggataacttacaagagctgactaagacacataag
atcacccgctttgcgctattcgatcaattcccatataccgaccatatggagtcgggtgta
tttttagagaggaaataa
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