Shewanella eurypsychrophilus: FM038_024845
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Entry
FM038_024845 CDS
T07746
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur00061
Fatty acid biosynthesis
seur00071
Fatty acid degradation
seur01100
Metabolic pathways
seur01212
Fatty acid metabolism
seur02024
Quorum sensing
seur04146
Peroxisome
Module
seur_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FM038_024845
00071 Fatty acid degradation
FM038_024845
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FM038_024845
09145 Cellular community - prokaryotes
02024 Quorum sensing
FM038_024845
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
seur01004
]
FM038_024845
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
seur04147
]
FM038_024845
Enzymes [BR:
seur01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FM038_024845
Lipid biosynthesis proteins [BR:
seur01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FM038_024845
Exosome [BR:
seur04147
]
Exosomal proteins
Exosomal proteins of breast milk
FM038_024845
Exosomal proteins of breast cancer cells
FM038_024845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QPG60206
LinkDB
All DBs
Position
complement(5760217..5762013)
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AA seq
598 aa
AA seq
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MSLEQYHLTRLIKQQSLQLGEAIALEGFEMAAPWHKVSWSDFDSISTKIAQALIHFGFDA
QDRIVILAQNCPQWTCADIASLKTRAVVVPIYPTSTFEQASYIVDDAKAKLIFAGDQAHY
QMACELTNTCSSLVKVVVFDKNVTLQDNDNHHYFDDLIAESYPSKTLIELDKRLEAANLD
DLLTLIYTSGTTGDPKGVMLDYRNIASMVKQHDNFLPFTPGDVSLAFLPLSHVFERGWSF
YVLCRGGHNVYLQNPMAVKEAIVQVRPHTLCVVPRFLEKVYSAVQDKVIKAPELRQKMFA
WAMSVGHKQSEVGQGRHKASLGLSLQWKLADKLVFSKLKQVLGGRLKFMPCGGAALDPNV
SAFFQSIDVPVLCGYGMTETTATATCNTLANRVPGSNGAALPEIEIKLGKDNEILLRGDT
VMRGYYNRPQETEQTFENGWLKTGDAGRIDEHGNLFITDRIKELMKTSNGKYIAPQRVEG
KVGCCPFIEQVAIVADAKNYVSALIVPAFETLEAWAKEKGIHYESPMELLRNTYVIEHFE
QRLKTLQSDLAGFEKIKKFTLLPEAFSMEAGLITPTMKLRRKVIYNKYAREISAMYGR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgagcagtatcatttaacacgtttaattaagcagcaaagcctacaactaggt
gaagctatcgcgctcgaaggattcgaaatggcggccccatggcacaaggtgagctggagt
gatttcgacagcataagcactaagattgcccaagctttgattcattttggtttcgacgcc
caagatcggatcgtcattttggcacaaaactgtcctcaatggacctgtgccgatatagcc
agcctcaagactcgtgcggtcgtggtgcctatctatccgaccagtacgtttgagcaggcg
agctatattgtcgatgatgctaaggcaaaattgattttcgccggtgaccaagcacattac
caaatggcctgtgagcttacgaatacctgtagtagcttagttaaagtcgtggtgttcgat
aaaaatgtgacgttgcaggataatgataaccatcactattttgatgatcttattgctgaa
agctatccatcaaaaacgctgatagagctggataagcgtcttgaagctgcaaatcttgat
gacttactaacattaatttatacctctggcactactggggacccaaaaggcgtgatgctc
gattatcgcaatatcgcttctatggttaagcagcatgataacttcctgccatttacgcct
ggtgatgtgtcgctggctttcttgcctcttagtcatgttttcgagcgaggctggagcttc
tacgtactttgtcgaggcggtcataacgtctatttacaaaaccctatggcggtcaaagaa
gccatagtccaggtgcgtcctcatacgctttgtgtggtaccgagatttttagaaaaggta
tatagcgcagttcaggataaggtcattaaagcgcctgaactcaggcagaagatgtttgct
tgggccatgtctgttggtcataagcagtccgaagtgggccagggccgacataaagcttca
ttgggcttaagcttacagtggaaacttgccgataaactggtttttagcaagctgaagcag
gtcttaggtggtcgtcttaagtttatgccttgtggtggtgcagcgcttgacccgaatgtc
agtgccttcttccagagtatcgatgtgccagttttatgtggctacggtatgaccgaaact
accgctaccgcaacttgtaatactctagctaatcgagtgccgggatctaatggtgcggct
ttacctgaaattgagataaagctaggtaaagataacgaaattctattacgtggcgatacc
gtcatgcgtggttactacaatcgaccacaagaaacagagcagacgtttgaaaatggctgg
cttaaaaccggtgatgcaggccgaatcgatgagcatggcaacctgtttattaccgatcgc
atcaaagagctgatgaaaacctctaacggtaagtatattgcaccgcaacgcgtagaaggc
aaagtgggttgctgcccattcatcgagcaagttgccatcgttgcagacgccaagaactat
gtttcagccttgattgttccggcatttgaaacccttgaagcttgggctaaagagaagggg
attcattatgaatcaccgatggaactgctgagaaatacctatgtgattgagcactttgaa
cagcgtctcaagacattacaaagtgatcttgctggtttcgaaaagattaagaaatttacg
ctattgccggaagctttttcgatggaagcgggtctaatcaccccgaccatgaagctacgt
cgcaaggtgatctacaataagtacgctcgtgagatcagtgcgatgtatggtagatag
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