Shewanella eurypsychrophilus: FM038_25790
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Entry
FM038_25790 CDS
T07746
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur03030
DNA replication
seur03430
Mismatch repair
seur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FM038_25790
03430 Mismatch repair
FM038_25790
03440 Homologous recombination
FM038_25790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seur03032
]
FM038_25790
03400 DNA repair and recombination proteins [BR:
seur03400
]
FM038_25790
Enzymes [BR:
seur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FM038_25790
DNA replication proteins [BR:
seur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FM038_25790
DNA repair and recombination proteins [BR:
seur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FM038_25790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QXP44860
LinkDB
All DBs
Position
complement(3453429..3454112)
Genome browser
AA seq
227 aa
AA seq
DB search
MIAQLFKSKLCWRAFRSHSDIISRYHRELMPAIAKDIGQSSLMAIDLEMTGLDPNHDQIL
SIGLIPIENSLLRLDSAEHKLIKVEGGVGQSATIHGILDKHLQDAIDLDEAISWFIEKTQ
GKVLVAHHTPLDLRFLQNAISSLYGEKVKLLAIDTLAIERKRLLRKHDLLKEGTLRLGAC
RERYGLPVYAAHNALVDALACGELLLAQAAAIGQGDRLTVAELLAIK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgatagctcagctgtttaaatctaaattatgttggcgcgcttttcgtagccattcagac
attattagccgatatcatcgtgaacttatgcctgctatcgctaaagatattggtcaatca
tccttgatggctatcgatttggaaatgactggcctagaccctaatcatgaccagatcctc
agtatcggcttaatacccattgaaaatagcctacttagactcgatagtgcggagcataag
ttaatcaaagttgagggcggagtcggtcaaagcgcgacgattcatggcattttggataag
catttacaagacgccatcgatctcgatgaagccattagttggtttattgaaaaaacccaa
ggtaaggtgctggtggctcaccatactccattagatttacgtttcttacagaatgcgatt
tcaagtctatatggggaaaaggtgaagttgttagccattgatacattagccattgaacga
aaacgtttgctgagaaaacacgatctgttaaaagaggggaccttgaggctcggtgcttgt
cgtgaaagatatggcttgccagtttatgctgcacataatgccttggtggatgcgttagca
tgtggagagttattactcgctcaagctgctgctataggccaaggagacagattgacggtt
gctgaattactcgctatcaagtga
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