Salmonella enterica subsp. enterica serovar Typhimurium D23580: STMMW_05221
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Entry
STMMW_05221 CDS
T01715
Name
(GenBank) DNA-binding protein Hu-beta
KO
K03530
DNA-binding protein HU-beta
Organism
sev
Salmonella enterica subsp. enterica serovar Typhimurium D23580
Brite
KEGG Orthology (KO) [BR:
sev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sev03032
]
STMMW_05221
03036 Chromosome and associated proteins [BR:
sev03036
]
STMMW_05221
03400 DNA repair and recombination proteins [BR:
sev03400
]
STMMW_05221
DNA replication proteins [BR:
sev03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
STMMW_05221
Chromosome and associated proteins [BR:
sev03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
STMMW_05221
DNA repair and recombination proteins [BR:
sev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
STMMW_05221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CBG23531
UniProt:
A0A6C7I7F1
LinkDB
All DBs
Position
548608..548880
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AA seq
90 aa
AA seq
DB search
MNKSQLIEKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPSFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgatcgaaaaaattgctgcaggggctgatatctctaaggctgcg
gctggacgtgcgttagatgcgattattgcttctgttaccgaatctctgaaagaaggggat
gacgttgcactggtaggctttggtacttttgctgttaaagagcgtgctgcccgtactggt
cgcaacccgcaaacaggtaaagagatcaccatcgccgctgccaaagtgccgagtttccgt
gcaggtaaagcgctgaaagacgcggtaaactaa
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