Salmonella enterica subsp. enterica serovar Typhimurium D23580: STMMW_12241
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Entry
STMMW_12241 CDS
T01715
Name
(GenBank) putative exported protein
KO
K19236
L,D-transpeptidase YcfS
Organism
sev
Salmonella enterica subsp. enterica serovar Typhimurium D23580
Pathway
sev01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sev00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
STMMW_12241
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sev01002
]
STMMW_12241
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sev01011
]
STMMW_12241
Peptidases and inhibitors [BR:
sev01002
]
Cysteine peptidases
Family C82
STMMW_12241
Peptidoglycan biosynthesis and degradation proteins [BR:
sev01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
STMMW_12241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
CBG24236
UniProt:
A0A6C7IAQ2
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All DBs
Position
complement(1293582..1294547)
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AA seq
321 aa
AA seq
DB search
MFNNTRLSRWWALLALTATIMLALPAQANTWPLPPPGSRLVGENKFHVVEDDGGSLEAIA
KKYNVGFLALLQANPGIDPYVPRAGSVLTIPLQTLLPDAPREGIVINLAELRLYYYQPGK
NTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTPTANIRARYKAQGIDLPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVTPGTKVNI
INTPIKASVEPGGVRLVEVHQPLSKNIGDDPQVLPIVLNGPMQAFKDAPQTDAAVMEHVM
EVRSGMPVDVTRQAEAKPQSL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaatacgcgactctctcgctggtgggcgttgcttgcgcttaccgcgaccatc
atgcttgcccttcccgcgcaggcgaatacgtggcctcttccgccccccggcagtcgactg
gtgggagaaaataaattccatgtcgttgaagacgacggcggctcgctggaggcgatcgcc
aaaaaatataacgtgggctttttagccctgttacaggccaaccccggcattgatccttat
gtgccacgcgcaggcagcgtgctaacgattccgctgcaaacgctgctaccggacgcgcca
cgtgaaggtatcgtcattaacctcgcggaattacggctttactattatcaaccggggaaa
aatacggtcacggtctaccctatcgggattggccaactgggcggcgataccctgacgcca
acgatggtgacgaccatttcggataaacgcgccaatccaacctggacgccgaccgccaat
attcgcgcccgttataaagcgcaaggtatcgatctccccgccgtggtgcctgccggtccc
gataacccaatgggacatcacgcgattcgtttagcggcctacggcggcgtctatctgtta
catggcacgaatgccgattttggcattggtatgcgcgtcagttccggctgtatccgtctg
cgcgacggtgatatagagacattgttccgtcaggtcacgccgggaaccaaagtgaatatt
atcaatacgccgattaaagcctcggtggagccaggcggcgtgcgactggtggaagttcat
cagccgctgtctaaaaatataggcgacgatccgcaggtgttgccgattgtgctgaatggc
ccgatgcaggcctttaaggacgcgccgcagaccgatgctgcggtgatggaacatgttatg
gaagtgcgttccggaatgccggtggatgtaacccgtcaagcagaggcgaaaccgcagtcg
ctgtaa
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