Salmonella enterica subsp. enterica serovar Typhimurium D23580: STMMW_23361
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Entry
STMMW_23361 CDS
T01715
Name
(GenBank) RNase Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sev
Salmonella enterica subsp. enterica serovar Typhimurium D23580
Brite
KEGG Orthology (KO) [BR:
sev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sev03016
]
STMMW_23361
Enzymes [BR:
sev01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
STMMW_23361
Transfer RNA biogenesis [BR:
sev03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
STMMW_23361
Prokaryotic type
STMMW_23361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
CBG25347
UniProt:
A0A6C7IDS1
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All DBs
Position
2443326..2444243
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AA seq
305 aa
AA seq
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MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPGKLERI
FISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIATTLRLSGSWTDFPLQIEE
ISAGDILDDGLRKVTAFRLEHPLECYGYRVVEHDKPGALNARALKAAGVTPGPLFQALKA
GKTVTLADGRQINGADYLAPAVAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASME
EKANARGHSSTRQTATLAREAAVGRLIMTHISSRYDDKGCQRLLAECRAIFPATELAYDF
SVFPV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaattaatttttttaggtacgtccgcaggcgttcccacgcgctcacgcaatgtaacg
gcaattttattacatctgcaacatccaacgcagccgggagtatggctttttgattgcggc
gaagggacacagcatcaaatgcttaataccgcgtttcatcccggtaagcttgagcgcatt
tttatcagccatcttcacggcgatcatttgtttggcctgccgggtctgctatgcagccgg
tcgatggcggggaacccccatccgctaaccgtatacggacctcaaggcgtgcgtgagttt
attgcaaccacactgcgtcttagcggttcatggaccgattttccgttgcaaattgaagaa
attagcgcaggtgatattcttgacgacggtctgcgtaaagtgaccgcgttcaggctggag
catccactggagtgctacggatatcgcgttgttgaacatgacaagcctggcgcgctgaat
gccagggcgttaaaagccgcaggcgttacgcccggcccgctgtttcaggcgttgaaggca
ggaaaaaccgtcacgcttgccgatggaaggcagatcaatggcgccgactaccttgctccc
gccgtggccgggaaatcagtggcgattttcggcgataccgcgccctgcgaggccgccctc
gcgctggcgcagggtgtggatgtgatggttcatgaaaccacgctggatgcgtcaatggag
gagaaagccaacgctcgcggacacagctccacccgtcaaaccgcgacgctggcgcgggaa
gctgccgttggtcggctaatcatgacccatattagctcacgctatgacgataaaggctgt
cagcgcttactggcggaatgccgcgctattttcccggcgacggagctggcttacgatttt
tctgttttcccggtttag
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