Salmonella enterica subsp. enterica serovar Typhimurium D23580: STMMW_28211
Help
Entry
STMMW_28211 CDS
T01715
Name
(GenBank) transcriptional activator of the formate hydrogenlyase system
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
sev
Salmonella enterica subsp. enterica serovar Typhimurium D23580
Brite
KEGG Orthology (KO) [BR:
sev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sev03000
]
STMMW_28211
Transcription factors [BR:
sev03000
]
Prokaryotic type
Helix-turn-helix
Other families
STMMW_28211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_3
GAF_2
AAA_5
AAA
HTH_8
AAA_16
Mg_chelatase
AAA_19
AAA_2
HTH_50
AAA_7
nSTAND3
PilB3_N
Motif
Other DBs
NCBI-ProteinID:
CBG25828
UniProt:
A0A6C7IER6
LinkDB
All DBs
Position
2996690..2998768
Genome browser
AA seq
692 aa
AA seq
DB search
MSYTPMSDLGQQGLFDITRTLLQQPDLASLSEALSQLVKRSALADSAGIVLWQAQSQRAQ
YYATRENGRPVEYEDETVLAHGPVRRILSRPDALHCNFHEFTETWPQLAASGLYPEFGHY
CLLPLAAEGRIFGGCEFIRQEDRPWSEKEYDRLHTFTQIVGVVAEQIQNRVNNNVDYDLL
CRERDNFRILVAITNAVLSRLDIDELVSEVAKEIHHYFNIDAISIVLRSHRKNKLNIYST
HYLDEHHPAHEQSEVDEAGTLTERVFKSKEMLLINLNERDPLAPYERMLFDTWGNQIQTL
CLLPLMSGKTMLGVLKLAQCEEKVFTTANLKLLRQIAERVAIAVDNALAYQEIHRLKERL
VDENLALTEQLNNVDSEFGEIIGRSEAMYNVLKQVEMVAQSDSTVLILGETGTGKELIAR
AIHNLSGRSGRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLD
EVGDMPLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRNDLYY
RLNVFPIQLPPLRERPEDIPLLVKAFTFKIARRMGRNIDSIPAETLRTLSSMEWPGNVRE
LENVVERAVLLTRGNVLQLSLPDITAVTPDTSPVATESAKEGEDEYQLIIRVLKETNGVV
AGPKGAAQRLGLKRTTLLSRMKRLGIDKDALA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatacacccatgagcgatcttggacagcaaggcttgttcgatatcactcgtacc
ttattgcagcagcccgatttggcgtcgctcagtgaagcgctttcgcaactggtaaagcgt
tcagcgctcgccgacagcgccggcattgtgctatggcaggcgcagtcgcaacgcgcacaa
tattatgcgacgcgagaaaatggccgtcctgttgaatatgaagatgaaaccgtactggcg
cacggcccggtacgtcgcatcctttctcgccccgatgcattgcactgtaatttccatgag
tttaccgaaacctggccgcagcttgccgcgagcggcctctaccctgaatttggtcattac
tgtctgcttcctttagccgcggagggccgtattttcggcggctgcgaattcatccgtcag
gaagatcgcccctggagtgaaaaggaatatgaccgtctgcatacgtttacccaaattgtc
ggcgtggtcgccgagcaaattcaaaaccgggtaaacaataacgtcgattatgatctgttg
tgccgcgaacgcgataacttccgtattctggttgcgattaccaacgccgtcctgtcgcgt
ctggatattgatgaactggtaagcgaagtcgcaaaagagattcaccactatttcaatatc
gacgcgatcagcatcgtgttgcgcagccatcgcaaaaataagctgaatatctactccacc
cactaccttgatgagcatcatccggcgcacgaacagagcgaagtcgacgaagccggcacg
ctcacggagcgcgtctttaaaagtaaagagatgctgcttatcaacctcaacgaacgcgat
ccgcttgccccctacgaacgcatgctgttcgatacctggggcaatcagatccagacgctt
tgcctgctgccgttgatgtccggcaagacgatgcttggcgtgctcaaactggcccagtgc
gaagaaaaagtgtttaccaccgccaacctcaagctgctgcgtcagattgccgaacgggta
gccattgccgtggataatgcgctggcctatcaggaaatccaccgactgaaggaacgcctg
gtcgacgaaaacctggcgctcacggaacagcttaataacgtcgacagcgagtttggcgag
atcatcggacgcagcgaagcgatgtacaacgtgctaaagcaggttgagatggtggcgcag
agcgacagtaccgtgctgattctgggcgaaacgggaaccggtaaagagttgattgcccgc
gccattcacaacctgagcggacgtagcgggcgcaggatggtaaagatgaactgcgccgcg
atgccggcggggctgctggaaagcgatctgtttggtcatgagcgcggcgcgtttaccggc
gccagcgcgcagcggattggccgtttcgagctggcggataaaagctcgctgtttctggat
gaagtgggcgacatgccgctggagctacagcctaagctgctgcgcgtccttcaggagcaa
gagtttgaacgtctcggcagcaataaactgatccagaccgacgtgcggctgatcgccgcg
actaaccgcgatctgaaaaaaatggtcgccgatcgcgaattccgtaacgatctctactat
cggctgaatgtttttccgatccagcttcctccgttgcgcgaacgtccggaagatattcca
ctactggtcaaagcgttcactttcaaaatcgcccgccgaatggggcgtaatatcgacagc
attcccgccgaaacgctgcgcacgcttagcagcatggaatggccggggaacgttcgcgag
ctggagaatgtcgtcgagcgcgccgtgctgctgacgcgcggcaatgtgctacaactgtcg
ctgccggatattaccgccgtaacgcccgatacctcgcctgttgcgactgaaagcgccaaa
gaaggcgaagatgaatatcagcttattatacgcgtgctgaaagagaccaatggcgtagtg
gctggaccaaaaggcgcggcgcagcgtctggggcttaaacgaaccaccctgctgtcgcgt
atgaagcgattgggtattgataaagacgcgttagcgtaa
DBGET
integrated database retrieval system
