Salmonella enterica subsp. enterica serovar Typhimurium D23580: STMMW_38921
Help
Entry
STMMW_38921 CDS
T01715
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
sev
Salmonella enterica subsp. enterica serovar Typhimurium D23580
Pathway
sev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STMMW_38921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sev03021
]
STMMW_38921
03019 Messenger RNA biogenesis [BR:
sev03019
]
STMMW_38921
Transcription machinery [BR:
sev03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
STMMW_38921
Messenger RNA biogenesis [BR:
sev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STMMW_38921
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CBG26905
LinkDB
All DBs
Position
4148458..4149717
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGESMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaagt
atggggctggaaaacctggcccgtatgcgcaagcaggacattatttttgccatcctgaag
cagcacgcaaagagtggcgaagatatctttggcgacggtgtgctggagatattgcaggat
ggatttggtttcctccgttctgcagacagctcctacctcgccggtcctgatgatatctac
gtttcccccagccaaatccgccgtttcaacctccgcactggtgataccatttctggtaag
attcgcccgccgaaagaaggtgaacgctattttgcgctgttgaaagttaacgaagttaac
tacgacaaaccggaaaacgcccgtaacaaaatcctctttgagaacttaaccccgctgcac
gcaaactctcgtctgcgtatggagcgtggtaacggttctaccgaagacttaacggcgcgc
gttctggatctggcttcgccgatcggtcgcggccagcgcggtctgattgtcgcgccgccg
aaagcgggtaaaaccatgctgctgcagaacatcgcgcagagcatcgcgtataaccacccg
gactgcgtgctgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggcgaagtggttgcttctacctttgacgaaccggcatcccgccacgtt
caggttgccgaaatggttatcgagaaggcgaagcgtctggttgaacacaagaaagacgtt
atcatcctgctcgactccatcacccgtctggcgcgcgcctacaacaccgtggtgccggct
tccggtaaagtattgaccggtggtgtggacgctaacgccctgcatcgtccgaagcgtttc
ttcggcgcggcgcgtaacgtggaagagggcggtagcctgactatcatcgcgacggcgcta
atcgataccggttccaagatggacgaagttatctacgaagagtttaaaggcaccggtaac
atggagctgcatctctcgcgtaagatcgctgaaaaacgtgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgctcaccactcaggaagagctgcagaaaatg
tggatcctgcgtaaaatcatccatccgatgggtgaaattgacgcgatggaattcctcatt
aacaaactggcgatgaccaaaactaatgacgactttttcgagatgatgaagcgctcataa
DBGET
integrated database retrieval system
