Salmonella enterica subsp. enterica serovar Typhimurium D23580: STMMW_40601
Help
Entry
STMMW_40601 CDS
T01715
Name
(GenBank) primosomal protein replication factor
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sev
Salmonella enterica subsp. enterica serovar Typhimurium D23580
Pathway
sev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STMMW_40601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sev03400
]
STMMW_40601
Enzymes [BR:
sev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STMMW_40601
DNA repair and recombination proteins [BR:
sev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STMMW_40601
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
IBR_1
Motif
Other DBs
NCBI-ProteinID:
CBG27073
LinkDB
All DBs
Position
complement(4326116..4328314)
Genome browser
AA seq
732 aa
AA seq
DB search
MSVAHVALPVPLPRTFDYLLPEGGVAKAGCRVRVPFGKQQERVGIVVSISDHSELPLDEL
KSVIEILDNEPIFSPSIWRLLLWAADYYHHPLGDVLFHALPVLLRQGKPASNAPLWYWFA
TEEGQAVDINSLKRSAKQQQALAALRQGKIWRYQVAELDFTDATLQTLRRKGLCELASET
PAFTDWRERYAVAGERLRLNTEQATAVGAIHSASDGFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVRQKKYRMLRLTRRAGNARPALQHVLDLKGQRLQAGLAPALIARMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG
STHMLPVGLGTEQLEQVLAPFFPGVPISRIDRDTTSRKGALEQHLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERQTLQLPPWTSHVIIRAEDHNNQQAPVFLQQLRNLI
QASPLSDDKLWILGPVPALAPKRGGRYRWQILLQHPSRIRLQHIISGTLALINTLPEARK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgcgcacgttgccttgcccgttccgcttccccgaacctttgattacctgctg
ccggaaggcggggtcgccaaagccgggtgccgcgtgcgcgtgccattcggcaagcagcaa
gagcgcgtgggcattgtcgtctcgattagcgaccacagcgaattgccgctcgatgaatta
aaatcggtcattgaaatcctggataacgagccaatcttttctccctccatctggcgctta
ctcctctgggcggcggattactaccaccatcccctcggcgacgttctgtttcacgctctg
ccggttttattgcgtcagggaaaaccagccagcaacgcgcccctatggtattggttcgcc
accgaagaggggcaagccgtcgatatcaacagcctgaaacgctccgccaaacaacaacag
gcgctggcggcgctacggcaaggaaagatctggcgctatcaggtagccgagcttgatttt
actgacgccacgctgcaaacgctgcggcgtaagggactttgtgagcttgccagtgaaacg
cccgcgtttaccgactggcgggagcgttatgccgtcgcaggagagcgcctgcggctgaat
accgaacaggcgacagcagtcggcgcgattcacagcgcgtcggacggtttctccgcctgg
ttgctggcaggcgtaaccggttccggcaagaccgaagtgtatctgagcgtgctggaaaac
gtcctcgcccagggcaaacaggcgctggtgatggtgccggaaatcggcctgacgccgcaa
acgatcgcccgttttcgcgaacgttttaacgcgccggtggaagtgctgcattccgggcta
aacgacagcgagcgtctttcggcatggctgaaagcgaaaaacggcgaagcggcgattgtc
atcggcacgcgttcctcgctgtttacgccgtttaaaaatcttggcgtgattgtcatcgac
gaagagcacgacagctcttataaacagcaggaagggtggcgctaccacgcccgcgatttg
gcagtgtatcgcgcccatagcgagcagatcccgattattctcggctccgccaccccagcc
ctggaaacgctatgtaacgtgcggcagaaaaaataccggatgctgcgtctgacgcggcgc
gcaggcaacgcccgcccagctctgcagcatgtgctggatttaaaaggccagcgtcttcag
gcgggactggcgcccgcccttatcgcccgtatgcgccaacatctccaggccgacaatcag
gtaattttatttcttaaccgccggggattcgcgcccgcgctgctttgccacgactgcggc
tggattgcagagtgcccgcgttgcgatcactactacacgctgcaccaggcgcagcatcat
ttacgctgtcatcactgcgacagccagcgtccggtaccgcgtcagtgcccctcctgcggc
tccacacatatgttaccggttgggttagggacggaacagctggagcaggtgctggcgccc
ttcttccccggcgtgccgatctcacgaatcgaccgtgataccaccagtcgtaaaggcgcg
ctggagcagcatctggcggaagttcaccgcggcggagcacgcatcctgataggcacacaa
atgctggcgaaaggccatcactttccggatgtcacgctggtggcgttgctggatgtcgat
ggcgcgcttttttccgcagattttcgttcggcggaacgcttcgcccagctctacactcag
gtttccggccgcgccgggcgcgcgggcaaacagggcgaagtggtgctccaaacgcaccat
cctgagcatcccctgctgcaaacgttactgtataaaggctatgatgcgtttgcggagcag
gcgctggcggaacggcaaacgctccagcttccgccgtggaccagccacgtcattattcgc
gcagaggatcataacaatcagcaggcgcccgtctttctccaacagttgcgtaatctgatt
caggccagcccgctatcagacgataagctgtggatcttaggtccggttccggccctcgcg
ccaaaacgcggcggccgctatcgctggcaaattttacttcagcatccttcacggattcgc
ctgcaacacatcatcagcggcacgctggcgttgatcaatacgctcccggaagcgcggaaa
gttaaatgggttctggacgtcgatccgattgaaggatag
DBGET
integrated database retrieval system
