Salmonella enterica subsp. enterica serovar Typhimurium D23580: STMMW_42981
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Entry
STMMW_42981 CDS
T01715
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sev
Salmonella enterica subsp. enterica serovar Typhimurium D23580
Pathway
sev03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sev00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
STMMW_42981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sev03019
]
STMMW_42981
03009 Ribosome biogenesis [BR:
sev03009
]
STMMW_42981
Messenger RNA biogenesis [BR:
sev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
STMMW_42981
Ribosome biogenesis [BR:
sev03009
]
Eukaryotic type
Pre-60S particles
RNases
STMMW_42981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
CBG27309
UniProt:
A0A6C7II85
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All DBs
Position
4616785..4617330
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AA seq
181 aa
AA seq
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MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDD
WNVRTHTGSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgatgaaaacaacctgatttggatcgatctggagatgacaggtctggacccc
gagcgcgatcgcattattgagatagccacactggtgacggatgccagcctgaacattctg
gcggaagggccgacgattgcggtacatcaatccgatgcgcaactggcgttaatggatgac
tggaacgtgcgcacccataccggtagcggcctggtagatcgcgttaaggcaagtacgatg
ggcgaacgagatgctgaactggcgacgattgaatttctgaaaacgtgggtgcctgcgggt
aagtcgccgatttgcggtaacagcatcggtcaggatcgtcgttttctgtttaaatatatg
ccggaactggaggcctacttccactatcgctatctggatgtcagtacgctcaaggaactg
gcgcgccgctggaagccggagattctggccggctttaccaagcagggcacgcaccaggcg
atggatgatattcgcgagtcggtggcggagctggcttactaccgcgagcatttcattaag
ctgtga
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