Saxibacter everestensis: LWF01_00275
Help
Entry
LWF01_00275 CDS
T10942
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sevr Saxibacter everestensis
Brite
KEGG Orthology (KO) [BR:
sevr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sevr03032
]
LWF01_00275
03400 DNA repair and recombination proteins [BR:
sevr03400
]
LWF01_00275
Enzymes [BR:
sevr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LWF01_00275
DNA replication proteins [BR:
sevr03032
]
Prokaryotic type
DNA Topoisomerases
LWF01_00275
DNA repair and recombination proteins [BR:
sevr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LWF01_00275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
SpoIID
Motif
Other DBs
NCBI-ProteinID:
WGW12237
LinkDB
All DBs
Position
57047..58087
Genome browser
AA seq
346 aa
AA seq
DB search
MRLRKSDQTKPGITRRRRGRGWQYFGPDGRTVDSEARSRVEALVIPPAWTDVWISPWHNG
HIQAVGTDDAGRRQYLYHELWVATRNSQKHVHGRDVGKRLPEARKLVARHLALPGMPRER
ALATAFRMLDVGRFRAGNQEYAESNGSFGLATLLKSHVRIDGDALVFDYAAKSGVRRISR
IEDSHLLDSIALMRRRRTGGEQLLAYRDHGRWIALDSADVNDYLRDVVGAETTAKDFRTW
HATVLAAAALAAESRRLGAEPWSQTARKKAVSQVMRFVADELGNTPAVARGSYVDPRIVD
LFWEGTTIGDAGRRGVRLTDDGDPLAGVLDVATSEAAETAVIRLLV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcttcgtaaatccgaccagacgaaacctggcatcacccgcagacggcgcggccga
ggctggcagtactttggccccgacgggcgcacggtcgactccgaagccaggagccgggtg
gaggcgctcgtcatcccgccggcctggacggacgtgtggatttcgccatggcacaacggt
catattcaggcggtcggcaccgatgacgccggccgccggcagtacctttaccacgagtta
tgggtggcaacccggaactcgcaaaaacacgtgcacggacgcgatgtcggaaagcggtta
ccggaggctcggaaactagttgcccggcacctcgcccttcccggcatgcctcgggagcgc
gcgctcgcgaccgccttccggatgctcgatgtcggtcgtttcagggccggcaatcaggag
tatgccgagtcgaacggcagctttggcctggcgactctgctgaaatcgcacgtccgcatc
gacggcgacgccctggtgttcgactatgcggcgaagtccggcgtacgtcggattagccgg
atcgaggattcgcacttgctggacagcatcgccctgatgcgacgccgtcgcaccggcggg
gagcagctcttggcctaccgcgaccacgggcgttggatcgcgctggattccgctgacgtc
aacgactatctacgcgacgtggttggcgccgaaaccactgccaaggacttccggacctgg
cacgcaaccgtgcttgctgcggcagcccttgcggccgaatcgaggcgcctcggagccgaa
ccctggtcgcagacggcccggaagaaggcggtcagccaggtgatgcggtttgtcgccgac
gaactgggcaatacgccggccgtcgcccgcggcagctatgtggatccccggattgtggac
ttgttctgggaaggaaccacgattggcgatgcggggcgtcgaggcgtgcggctaacggac
gatggcgacccgctggccggggttctggacgtggcaacatccgaagccgccgagaccgca
gtcattcgcctgttggtgtag
DBGET
integrated database retrieval system
