Saxibacter everestensis: LWF01_04870
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Entry
LWF01_04870 CDS
T10942
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sevr Saxibacter everestensis
Brite
KEGG Orthology (KO) [BR:
sevr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sevr03016
]
LWF01_04870 (truB)
Enzymes [BR:
sevr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LWF01_04870 (truB)
Transfer RNA biogenesis [BR:
sevr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LWF01_04870 (truB)
Prokaryotic type
LWF01_04870 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WGW13110
LinkDB
All DBs
Position
993445..994362
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AA seq
305 aa
AA seq
DB search
MGNTARDGDTTPAPTGILLVDKPQGWTSHDVVARARRLLGTKKVGHAGTLDPMATGLLLL
GVGKGTRLLTYLVGEDKTYSAVIRLGSSTPTDDADSTADAFADPTRLGGITDDDIRAGIS
ALTGDIQQVPSAVSAIKVDGVRSYQRVRAGEDVVLKPRPVLIRRFELLDVQREVGAIDLS
VTVECTSGTYVRALARDLGNGLGVGGHLTALRRTLVGRFSVNEALELPGWDEPAETPALM
SLAEVARKCLAVRDLSDDDVRALGYGQWIAESSNPGPVACIGQQGDLVAIVENIRGKAKP
VVVFS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatactgcgcgcgacggtgacactacgcctgcgccgaccgggatcctgctagtc
gacaagccccagggctggacgagccatgatgtcgttgcccgggcacggcgcctactcggc
accaagaaggtcggccacgccggcacactcgatccgatggcgaccggcctgctgctgctt
ggcgtgggaaagggcacccggctgctgacctacctggtcggcgaggacaagacatactcc
gccgttatccggctcgggtcctcgacgcccaccgacgacgctgacagcacggccgatgcc
ttcgccgatccgacccgcctcggtggcatcacggatgacgacatccgcgcggggatctca
gcgctcaccggtgacattcaacaggtgccaagcgccgttagcgcgatcaaggtggacgga
gtgcgttcctatcagcgggtacgggccggcgaggacgtcgtgctcaagccgcgcccagtg
ctgatccggcgctttgagttgctcgacgtgcagcgtgaggtgggagccatcgacctgagc
gtcacggtcgaatgcacctccggaacgtacgttcgggcgcttgcccgcgacctcggtaac
ggactcggggtgggcggccatctgaccgcactcaggcgaacactggtcggacgattctcc
gtcaatgaggcattggaattacctggctgggatgaaccggcggaaactccggctctgatg
tcgctggccgaggtcgccaggaagtgcctggccgtgcgggatctcagcgacgatgatgtc
cgggcgctggggtatgggcagtggattgccgagagcagtaatcccggcccggtcgcctgc
attggccagcagggcgacctggtggccatagtggaaaacattcggggcaaggcaaagcct
gtcgtcgttttcagctag
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