Saxibacter everestensis: LWF01_04910
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Entry
LWF01_04910 CDS
T10942
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sevr Saxibacter everestensis
Pathway
sevr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sevr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LWF01_04910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sevr03019
]
LWF01_04910
03016 Transfer RNA biogenesis [BR:
sevr03016
]
LWF01_04910
Enzymes [BR:
sevr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LWF01_04910
Messenger RNA biogenesis [BR:
sevr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LWF01_04910
Transfer RNA biogenesis [BR:
sevr03016
]
Prokaryotic type
tRNA degradation factors
LWF01_04910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
PCB_OB
KH_KhpA-B
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
WGW13118
LinkDB
All DBs
Position
999920..1002160
Genome browser
AA seq
746 aa
AA seq
DB search
MGLNPESAVAVLDNGRFGKHTIRFETGRLAQQAAGCAAAYLDDETMLLSATAVGKHPKDN
FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLRNEVQV
VITVMAMHPDHLYDVLAINAASMSTQLSGLPFSGPIGGVRVALIEDQWVAFPNHSDLENA
VFDMVVAGRVVGDDVAIMMVEAEATDNSWNLIKENGATAPTEEIVAQGLEASKPFIRELV
RAQAELAERAAKPVAEYPRFLDYQDDVYQAVESAAHDELAAAFQIADKQERDDKSDEIKA
RVLEQLAGQFEGREKEISGAFKGLTKKVVRKRILTEQVRIDGRGLTDIRPLTAEVGVLPR
VHGSAIFERGETQILGVTTLNMLKMEQQIDSLAPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTLGLLNAGVP
LRAPVAGIAMGLVSDVVETESGPQTAYAALTDILGAEDAFGDMDFKVAGTSEFVTAIQLD
TKLDGIPASVLAAALTQAREARLSILDVLNGAISAPGEMAVTAPRIISVKIPVDKIGEVI
GPKGKMINQIQEDTGADISIEDDGTVLIGATDGDSAEAARAAVNAIANPQVPEVGERYLG
TVVKTTSFGAFISLTPGKDGLLHISEMRKLVDGKRVDNVDDVVGVGQKIQVEITKVDDRG
KLSLSPVVADGSADESADSAAEGADA
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
ttgggtctgaaccctgaatccgccgttgccgtccttgataacggacgcttcggaaaacac
actattcgcttcgagaccggccgactggcccagcaggcagcaggatgcgccgccgcttac
ctcgacgatgaaacgatgctgctctcggcgaccgccgttggcaagcacccgaaagacaac
ttcgacttcttcccgctgacggtcgacgtcgaggagcggatgtacgctgccggccggatc
cccggatccttcttccgccgcgagggacgtccgtcaaccgacgcgatcctgacctgccgg
ttgatcgaccgaccgctgcgcccgtccttcgtttcgggactgcgcaacgaggtccaggtc
gtcatcacagtgatggcgatgcacccggaccacctgtacgacgtgctggcgatcaacgcc
gcgtcgatgtcgacgcagctttccggcctgccgttctccggtcctatcggtggcgtgcga
gtcgccctgatcgaagaccagtgggttgcgttcccgaaccactcggatctggaaaacgcc
gtgttcgacatggttgttgccggccgggtcgtcggtgacgacgtcgcgatcatgatggtc
gaggccgaggcaaccgacaactcgtggaacctgatcaaggaaaacggtgccaccgcaccg
actgaagagatcgtggcacaggggctcgaagcctcgaagccgttcatccgcgaactggtc
cgggcgcaggcagagcttgcggaacgtgccgccaagccggtcgccgagtacccgcgcttc
ctcgactaccaggatgacgtgtatcaggcggttgaatccgccgctcatgacgaactcgcc
gcggcattccagatcgccgacaagcaggagcgcgacgacaagtccgacgagatcaaggcg
cgcgtccttgagcagctcgcagggcagttcgaaggccgcgagaaggaaatctccggtgcg
ttcaagggcctgaccaagaaggtcgtgcgtaagcggattctcaccgagcaggtccggatc
gacggccgtgggctgaccgacatccgtccgctgacagccgaggtcggcgtccttccgcgg
gtgcacggatcggcgatcttcgagcgcggcgaaacccagatcctgggcgtgacaacgctc
aacatgttgaagatggaacagcagatcgattcgctggcgccggttacccgcaagcggtac
atgcataactacaacttcccgccatactcgaccggtgagaccggccgggtcggaagcccg
aagcgtcgcgaaatcggtcacggtgcgcttgcggagcgtgccctggttccggttctgccg
acccgcgaagaattcccgtacgcgatccgtcaggtatcggaggcactcagctccaacggc
tcgacgtcgatgggttctgtctgcgcgtcgacgctcggcctgctgaacgccggtgtgccg
ctgcgcgctcctgtcgccggtatcgcgatgggcctggtttccgatgttgtcgagaccgag
tccggtccacagacggcttacgccgcgctgaccgacatcctcggcgccgaagacgcattc
ggcgatatggacttcaaggtcgcaggtacctctgagttcgtcacggcaatccagctcgat
accaagctggacggaatcccggcatcggttctggctgccgcgctgacccaggcgcgcgag
gcacgcctgtccatcctggatgtgctcaacggcgcgatctcagctccgggcgaaatggct
gtcaccgctcctcggatcatctcggtgaagatcccggtcgacaagatcggcgaggttatc
gggcctaagggcaagatgatcaaccagatccaggaagacaccggcgccgacatctcgatc
gaagatgacggaaccgttctgatcggagcaacggacggggattcggctgaagcagcccgc
gccgccgtgaacgcgatcgccaacccgcaggtccccgaggtcggcgaacgctacctcggc
accgtcgtgaagaccaccagctttggtgccttcatctcgctgactccgggcaaggacggc
ctgctgcacatctctgagatgcgcaagctggttgacggcaagcgcgtcgataacgtcgat
gacgttgtcggtgtcggccagaaaatccaggtcgagatcaccaaggtggacgatcgcggc
aagctgtcgctgtcgcctgtcgtcgccgatggttcggcagacgagtctgccgattccgcg
gccgaaggcgccgacgcgtaa
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