KEGG   Saxibacter everestensis: LWF01_04965
Entry
LWF01_04965       CDS       T10942                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sevr  Saxibacter everestensis
Pathway
sevr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sevr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LWF01_04965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sevr03019]
    LWF01_04965
Messenger RNA biogenesis [BR:sevr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LWF01_04965
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: WGW14005
UniProt: A0ABY8R065
LinkDB
Position
1013767..1015398
AA seq 543 aa
MRIVALGGLGEVGRNMTVFEHAGKLLIVDCGVLFPEDQQPGVDLILPDFDYIKDRLDDVL
AVILTHGHEDHIGAVPYLLRQRADIPLIGSQLTLALIEAKLKEHRIKPYTLSVKEGQTEQ
LGPFDCEFVAVNHSIPDALAVAIRTSAGTVLHTGDFKMDQLPLDGRITDLRAFARLGEEG
IDLFMVDSTNADVPGFTTAERDIGPVLEAEFGRAERRVIVASFSSHVHRVQQVFDAASAH
GRKVALVGRSMVRNMKIAADLGYLNIPRGVLVDLKDLGNLPDDQVVLMCTGSQGEPMAAL
SRMANQDHKIDIGDGDTVILASSLIPGNENSVFRVINGLMRLGANVIHKGTAKVHVSGHA
SAGELLYCYNIVKPRGVMPVHGETRHMLANAKLAEATGVAPENIVLADDGTVIDMVDGVS
RIVGQVDCGLVFVDGSSVGAVTEADLKDRRILADEGFVSIFLAVDSTTGQVIAGPEIHAR
GVAEDDAVFDDIKPKIRAAVLDAHRGGGVDQHQLQQVVRRTIGRWAASKLRRRPMIVPIV
VEV
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgcggatcgtcgcactcgggggccttggcgaggtcggtaggaacatgaccgttttcgag
cacgcaggcaagctgctgatcgtggattgcggtgtgctctttcccgaggaccagcagcca
ggcgtcgacctgatcctgccggacttcgactacatcaaggaccggctcgacgatgtgctc
gccgttatcctcacccacggccacgaggaccatatcggcgcagttccatacctgctccgg
cagcgggcggatatcccgctgatcggctcgcagctgaccctggcgctgatcgaggccaag
ctcaaagaacaccggataaagccctacacgctgagcgtcaaagagggccagaccgagcaa
cttggcccattcgactgcgaattcgtcgcggtcaaccactcgattcccgacgcgctcgcg
gtcgccatccggaccagcgccggcactgtgctgcacaccggcgacttcaaaatggaccag
ctgccgctggacgggcggatcacagaccttcgggcattcgcgcggctcggcgaagagggc
atcgacctgttcatggttgattcaaccaatgccgacgttcccggcttcaccaccgcggag
cgcgacatcggcccggtgctcgaggccgagttcggccgcgccgaacgccgggtcatcgtg
gcgtcgttctcctcgcacgtgcaccgcgtccagcaggtgttcgatgccgccagtgctcac
ggccgcaaggttgcgctggtcggccggtcgatggtgcgcaacatgaagatcgccgccgac
ctgggctacctcaacattccgcggggcgtactggtcgacctcaaggacctgggaaacctg
cccgacgatcaagttgtgctgatgtgcaccggatcgcagggagagccgatggcggcgctg
tcccggatggcgaaccaggaccacaagattgacatcggcgatggtgacaccgtcatcctg
gcttcttcgctgatccccggtaacgagaactcggtgttccgggtgatcaacggcctgatg
cggctcggcgcaaacgtgattcacaaggggacggcgaaggtccacgtctccggccatgcc
tccgccggcgagttgttgtactgctacaacatcgtcaagcctcgtggcgtgatgccggtt
cacggcgaaaccaggcacatgctggcaaacgccaagctcgccgaggccaccggcgtcgcg
ccggagaacattgtgcttgccgacgacggcaccgtgatcgacatggtcgacggggtcagc
aggattgtcggccaggttgattgcggactggtattcgtggatggatcttccgtcggagcg
gtcaccgaagccgatctgaaggaccgcagaatacttgccgatgagggcttcgtctcgatc
ttcctcgcggtcgattcaacgacgggccaggttatcgccggcccggaaatccatgccagg
ggtgtcgcggaagacgacgcggttttcgacgacatcaagccgaagattcgcgcagcagtc
ctcgacgcgcatcgcggcggcggagtcgatcagcaccagctgcagcaggtggtccggcga
acgatcggccgctgggcggcatcgaaacttcgtcggcgtccgatgatcgttccgattgtc
gtcgaagtctga

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