Saxibacter everestensis: LWF01_06015
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Entry
LWF01_06015 CDS
T10942
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sevr Saxibacter everestensis
Pathway
sevr03030
DNA replication
sevr03430
Mismatch repair
sevr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sevr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LWF01_06015 (dnaE)
03430 Mismatch repair
LWF01_06015 (dnaE)
03440 Homologous recombination
LWF01_06015 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sevr03032
]
LWF01_06015 (dnaE)
03400 DNA repair and recombination proteins [BR:
sevr03400
]
LWF01_06015 (dnaE)
Enzymes [BR:
sevr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LWF01_06015 (dnaE)
DNA replication proteins [BR:
sevr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LWF01_06015 (dnaE)
DNA repair and recombination proteins [BR:
sevr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LWF01_06015 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
HHH_3
tRNA_anti_2
B1
Motif
Other DBs
NCBI-ProteinID:
WGW13321
UniProt:
A0ABY8QXZ5
LinkDB
All DBs
Position
1245233..1248790
Genome browser
AA seq
1185 aa
AA seq
DB search
MSQGKDSFVHLHVHTEYSMLDGAAKLGQLFEEASRLEMPAIATTDHGFLFGAFDFWKHAT
EAGIKPIIGIEAYVAPGTSRHDRTRVKWGEKHQAGDDVSGGGAYTHMTLLSKDNAGMQNL
FRMSSIGSLDSVFAKWPRIDRELLNTYGKSLIATTGCPSGEVQTRLRLGQYAEAKAAAAE
FQDIFGKENYYCELMDHGLSIEKRVTKDLLRLSKELSIPLVATNDLHYTHEADSKAHEAL
LSVQSGSTLLEPTYDQGGSRFAFSGSGFYLKSAAEMRSLFQEMPEACDNTLAIAEQCEVS
FNTNANFMPRFPCPPGEDETSWMVKEVEKGLHYRYPDGIPDEVRRQANYEVEVITNMGFP
GYFLVVADFINWSKDNGIRVGPGRGSGAGSMVAYAMRITDLDPLKHGLIFERFLNPDRVS
MPDFDVDFDERRRGEVIRYVTEKYGDDRVAQIVTYGTIKAKQALKDSARVLGYPFSMGET
LTKAMPPTIMGKDIPLTGIEDPAHKRYGEAEDFRTVLRNDPEAGKVFELAKGLEGLKRQW
GVHAAGVIMSSEPLLDVIPIMRRLQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIIDDA
LDNIKFNGKERPDLEKLELDDPETYALLARGDTLGVFQFDGGPMRSLLRLMRPDNFEDIS
AVGALYRPGPMGANSHTNYALRKNGQQEITPIHPELAEPLEEILGTTHGLIVYQEQVMAI
AQKVAGYSLGQADLLRRAMGKKKKSELDKQFAGFSEGMKERGFSAAAVKALWDILLPFSD
YAFNKAHSAAYGVVSYWTAYLKAHFPAEYMAAVLTSVGDDKDKSAIYLNECRRLHISVLP
PDVNESARNFAPVGKDVRFGMSAVRNVGGNVVDGIVAAREEKGAFTSFQDFLDKVPAQVC
NKRTIESLIKAGGFDSLGHTRRSLVEIHEEAVDSVVGVKRQEAKGQFDLFAGLGAADETS
GFAVVIPDRPEWDKKEKLAFERDMLGLYVSDHPLNGLEKILAEQAEVSIARLIEDDARPD
GSQVTIAGMITSLQRKVSKNSGNPYAIATIEDLDASIEVMFFGQVYQPVATILAEDLIVT
VKARIRRRDEGALSLMAMEITLPDVSDAAGTGPVAISMPLTKCTPPMVERLADVLRTHPG
KNEVHLRLTQPGRATLMRLDRSLRVEPNPALYGDLKALLGPSCLV
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagggtaaagactccttcgttcacttacacgtgcacacggagtactcgatgctc
gacggtgccgcaaagctcggccagttgtttgaagaggcgtcccggcttgagatgccagcg
atagccacaaccgatcacggcttccttttcggcgccttcgacttctggaagcacgccacg
gaagcgggcatcaagccgatcatcggtatcgaggcttatgtcgctccgggcaccagccgt
cacgaccgtacccgggtcaagtggggcgagaagcatcaggccggtgacgatgtctccggt
ggcggcgcgtacacgcacatgaccttgctgagcaaggacaacgccggaatgcagaacttg
ttccggatgtcgtcgatcggttcgctggacagtgtattcgccaaatggccgcggattgac
cgcgaactgctgaacacgtacggcaagagtctgatcgcaaccacgggttgcccctcgggt
gaggtgcagacccggctgcggcttggccagtacgccgaggccaaggccgccgccgccgaa
tttcaggacatcttcggcaaggagaactactactgcgagctgatggaccatggcctctca
atagaaaagcgggtcacgaaggacctgctgcggttgtcgaaggaactgagcatcccactc
gtcgctaccaacgacctgcactacacccatgaggccgactccaaggcgcacgaggcgctg
ttgtcggtgcaatccggttccaccctgctcgaaccgacctatgaccagggtggttcccgc
ttcgccttcagcggctcaggcttttacctgaagtccgcggcagaaatgcgttcgctgttc
caggagatgccggaggcatgcgacaacacgctcgcgatcgccgagcagtgcgaggtgtcg
ttcaacaccaacgccaacttcatgccgcgcttcccttgccctccgggcgaggatgaaacc
tcgtggatggtcaaggaagtcgagaaggggctgcattaccgctacccggacggtatacct
gacgaggttcgcaggcaggcgaactacgaggtcgaagtcatcacgaacatgggcttcccc
ggttacttcctcgtggttgccgatttcatcaactggtcgaaggacaacggaatccgggtc
gggccgggccgtggctccggcgccggttcgatggtcgcctacgcgatgcggatcaccgac
ctcgacccgctgaaacacggcctgatctttgagcgcttcctgaatccggaccgggtgtcg
atgcccgacttcgacgtcgacttcgacgagcgtcgtcgcggcgaggtgatcaggtacgtg
accgagaagtacggcgacgaccgggtcgcccagatcgtcacctatggaacgatcaaggcc
aagcaggcgctcaaggactctgcgcgggtgctcggctatccgttctcgatgggtgagacc
ctgaccaaggcgatgccgcccaccatcatgggtaaggacatcccgctgaccggcatcgag
gacccggcgcacaagcgttacggcgaggcggaagacttccgcacagtgctgaggaacgac
cccgaggccgggaaggtgttcgagctcgccaagggacttgaaggcctgaaacgccagtgg
ggcgtgcatgccgcgggcgtgatcatgagttccgagccgttgctcgacgtcatcccgatc
atgcgccgcctgcaggacggccaggtgatcacccagttcgactatcccacctgcgaaggc
ctcggcctgatcaagatggacttcctcggcctgcgaaatctcacgatcatcgacgacgcc
ctggacaacatcaagttcaacggcaaggaacgtccggacctggagaagttggagctcgac
gacccggagacctacgcgctgctggcccgcggcgacactctcggcgtcttccaattcgac
ggtgggccgatgcgctctctgctgcggcttatgcggccggacaacttcgaggacatttcc
gctgtcggcgccctgtaccgtccgggcccgatgggggccaactcgcacacgaattacgcg
ctgcgtaagaacggccagcaggaaatcactccgatccaccccgagctggccgagccactc
gaggagatccttggcaccacgcacggcctgatcgtctatcaggagcaggttatggcgatc
gcgcagaaggtcgccggctactcgctaggccaggccgacctgctcaggcgtgccatgggc
aagaagaagaagtccgagctggacaagcagttcgccggattctccgagggcatgaaagag
cgcggcttcagtgccgccgccgtcaaagcgctctgggacattctgctgccgttctccgac
tacgccttcaacaaggcgcactcggccgcgtacggcgtggtgtcttactggaccgcctat
ctcaaggcgcatttcccggccgagtacatggccgccgtgctcaccagcgtcggcgacgac
aaggacaaatccgcgatctacctcaatgagtgccgccggctgcacatctcggtgctgcca
ccggacgtgaacgaatcggcgcgcaacttcgccccagtcggcaaggatgtccgtttcggc
atgagcgcggtgcgaaacgttggcggtaacgtcgtcgacggcatagtcgcagcacgcgag
gagaagggcgcattcacctcgttccaggatttcctcgacaaggttccggcgcaggtctgc
aataagcgcaccatcgagtcgctgatcaaggccggcggattcgactcgcttggccacacc
aggcgatccctggttgaaatccacgaggaagccgtcgattcggttgtcggcgtgaagcgg
caggaagccaagggccagttcgacctgttcgccggtctcggcgcggccgacgagacctcg
ggcttcgccgtcgtgattccggatcggccggagtgggacaagaaggagaagctcgccttc
gaacgcgacatgctgggactttacgtttcggaccatccgctgaacggactggagaagatt
cttgccgagcaggccgaggtgtcaatcgccagattgatcgaagacgacgcgcgcccggac
ggctcacaggtcaccatcgccggcatgatcaccagcctgcagcggaaagtctcgaagaac
agcggcaacccctacgccatcgccaccatcgaggatctcgacgcaagcatcgaggtgatg
ttcttcggacaggtctaccagccggtggcgacgattctcgccgaagacctgatcgtcacg
gtgaaggcgcgcattcgccggcgtgacgaaggcgcgctgtcgctgatggcgatggagatc
accctcccggacgtttccgatgctgccggaaccgggccggtcgccatctcgatgccattg
accaagtgcaccccgccgatggtcgaacggctggcggacgtactccggacccatccgggt
aagaacgaggtgcacctgaggctgacgcagcccggccgggccaccttgatgcgcttggac
cgcagcctcagggttgagccgaatccggcgctctacggtgacctgaaggccctgctgggt
ccgagctgcctggtctag
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