Saxibacter everestensis: LWF01_11495
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Entry
LWF01_11495 CDS
T10942
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
sevr Saxibacter everestensis
Brite
Enzymes [BR:
sevr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LWF01_11495 (hrpA)
Messenger RNA biogenesis [BR:
sevr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LWF01_11495 (hrpA)
BRITE hierarchy
Other DBs
NCBI-ProteinID:
WGW10750
LinkDB
All DBs
Position
complement(2400943..2405043)
Genome browser
AA seq
1366 aa
AA seq
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MSEPTSLGTDPSPDTDRGALRRRLATLSYLDERRLRRRLDQTRQIKDAAKRARIIAEIDA
AVDAASVRLERRIAARPEVSYPPELPVSARKDDIAAAIAANQVVIIAGETGSGKTTQLPK
ICLEVGRGVRGMIGHTQPRRIAARTVAERISAELGVELGGAIGYQVRFTSQVAGETSVKV
MTDGILLAEIQRDKMLSGYDTIIIDEAHERSLNIDFILGYLKNLLPKRPDLKVIITSATI
DPGAFAAHFNDAPIIEVSGRTYPVEVRYRPLIEDGSDAAEGEDDDGPGNAGDAFESRTRD
QTEAVQDAVDELLAEAPGDILVFLSGEQEIRDTADALAGHLARRRNALARPVDVIPLYAR
LSAGEQHRVFQQHSTQRIVLATNVAETSLTVPGIKYVIDTGTARISRYSARTKVQRLPIE
RISQASANQRSGRCGRTSPGICVRLYSEDDFDSRPEFTDPEILRTNLASVILQMASLGFA
RTDADLTRFPFLQPPDVRSVRDGRTLLTELGALRVGDDGGSTLTEIGRSLAQLPIDPRLA
RMVVEADKRGCAAEVFIIAAGLSIQDPRERPAEHREAASTKHRRFSHEHSDFLAYLNLWN
YMQAKQRELSSSQFRKMCRNEFLNFMRLREWQDLVAQLRQMAKGVGIQAAQVQWAGAGSE
GPGAGSEAADSAPQDTDALADQVHRALLSGLLTQIGVKNGEKNDYLGTRGAKFAVFPGSG
LFKKPPRHLMAAELVETSRLWARVNARIDPAWIEELGGDLLKRNYSEPHWEKKRGAVVAF
EKVTLLGVPIVASRKVNYGRVDPVLSRELFIRHALVEGDWSTSHKFFAANRRLIDDVADL
ESRARRRDLLVDDEKLFEFYDSKIGAEVVSAAHFDAWWKKARAKDPHLLDFSAAMLLAGD
ADEISDQDYPSSWPMPDGSDAALTYQFEPGADADGVTVHLPVDTLNQVEEEVFSWQIPGL
REDLVTALIRSLPKPLRRNFVPAPDVAGKVLETLEPYVGDIRVALAAELGRLSGIQLEAE
DFDLSKVPDHLLLTFRVVDDRKKKLRESKDLGTLRAGLAPAVQVSISRAATGLEKSGLTS
WDFGELPAEFDSNSHGRRVRGYPALMDDGTSVSLRVLDRKSSAAAATWAGVRRLVHLGVP
SPVGYVQKHLSNQEKLTFARDSAGVRTLLDDCAVAAIDRLMVEFGLDPESEALPVREASD
FEALRVFVADRYLDATFDVVRIVERVLSAAARIDRAISKINSLSLVSGLADLRAQVDGLL
QPGFVAETGWQQLQHLPRYLTAAERRLDKLTDNAARDRQLMERVRLQADAFEKAKAKLKP
GTPPGARLRGVRWMLEELRVSFFAQELGTVYPISEKRIAKALAEAQ
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccaacttcgcttggcaccgatccttcacctgacaccgaccgtggcgcgctg
cggcggcgcttggcgacgctgagctacctggatgagcgacggttgaggcgccgtctggac
cagacccgccagatcaaggacgcggcgaagcgtgccaggatcatcgccgagatcgacgcg
gccgtcgatgcagccagtgtccggctggaacggcgaatcgccgcccgtcccgaggtgagc
tacccgccggagctgccggtcagcgcgcggaaggacgatattgctgcggccatcgccgcc
aatcaggtcgtcatcatcgccggagaaaccgggtcaggtaagacgacgcagctcccgaag
atctgtcttgaggtcggccgtggagtccgcggaatgattggtcacacgcagccccggcgg
atcgccgcgcggaccgttgccgagcggatttcagctgaactcggagtcgagctcggcggc
gcgatcggctaccaggtgcgatttacgtcccaggttgccggcgagacgtcggtgaaggtg
atgacggacggaatcctgctggccgagattcagcgggacaagatgctcagcggctacgac
acgatcatcatcgacgaggcgcacgaacgcagcctgaacatcgatttcatcctgggttac
ctaaagaacctgctgccgaaacgtcccgatctcaaggtaatcatcacctcggcgacgatc
gatccgggggccttcgcggcgcatttcaacgacgcgccgatcatcgaggtttccgggcga
acatatccagtcgaggtgcgataccgtccgctgatcgaggacggctcggacgccgccgag
ggcgaggacgacgacgggccgggaaacgccggtgacgcattcgagtcccggacccgggat
cagacagaggcggtgcaggacgccgtcgacgagctactggccgaggctcccggcgacatc
ctggtctttctgagcggggagcaggagatccgggacaccgccgatgcgctcgccgggcat
ctggccaggcggcggaatgcattggccaggccggtcgacgtcatcccgctgtacgccaga
ctttccgcgggggagcagcacagggtcttccagcaacacagcacccagcgcatcgtgctt
gccacgaacgttgccgagacgtcgctgacggtgccaggcatcaagtacgtcatcgacacc
ggaaccgccagaatctcccggtactctgcgcggacgaaggttcaacggcttccgattgaa
cgcatctcgcaggcgtcggccaatcagaggtccgggcgttgtggacggacaagtccggga
atttgcgttcggctctacagcgaggacgacttcgactcccggcccgaattcaccgatccg
gaaatcctgcgtaccaacctggccagcgtgattttgcagatggcgtcgctgggcttcgcc
cgcacggacgccgacctgaccaggttcccgttcctgcagccgccggacgtgcgcagcgtc
cgcgacggacgcacactgctcaccgagctcggcgcgctgcgcgtcggcgatgacggcgga
tcgacactcaccgagatcggccgctcgctcgcccaactgccgatcgatccccggctcgcc
cggatggtcgtcgaggcggacaagcgcggttgcgcggcagaggtcttcatcattgccgca
ggcttgtcgatccaggaccctcgggagcgcccggccgaacaccgtgaggcggcctcaacg
aagcaccgacggttcagccacgaacattcggatttcctcgcctacctcaatctgtggaac
tacatgcaggccaaacagcgcgagctgtcgtccagccagttccggaagatgtgccgcaac
gagttcctcaacttcatgcgcttgcgcgaatggcaggatctggtggctcagctccggcag
atggccaaaggcgtcgggattcaggcagcgcaagtgcagtgggccggtgccggtagcgag
gggccgggtgctgggagcgaggctgcagactcggcgcctcaggacacagacgcgctggcg
gatcaggtccaccgtgcactgctctcgggcctgctgacccagatcggagtgaagaacggg
gagaagaacgactatctcggcacccgcggcgcgaagttcgcggtattcccgggatcaggc
ctgttcaagaagccgccacgtcatctgatggcggccgagttggtggaaacctcgaggctg
tgggcccgggtcaacgcacgcatcgatccggcgtggatcgaggaactcggcggagacctg
ctgaaacgcaactacagcgaaccgcactgggagaagaagcgcggcgccgtcgtcgccttc
gagaaggtcaccctgcttggcgtcccgatcgtcgcctcccgcaaggtgaactacggccgg
gtcgacccggtgctgtcccgggaacttttcatccggcatgcgctcgtcgagggcgattgg
agcacatcgcataagttcttcgccgcgaatcggcggctgatcgatgacgtagccgatctc
gagtcccgcgctcgccgtcgcgatctcctggtcgatgacgagaagctgttcgagttctac
gattcgaaaatcggcgccgaggtggtatccgccgcacacttcgacgcgtggtggaagaaa
gcccgggcgaaggatccgcacctgctggacttctccgccgccatgttgctcgccggagac
gccgacgagatcagcgatcaggactacccgagcagctggccgatgccagacggttcggac
gcggcgcttacctaccagttcgaaccgggtgcggatgccgacggcgtcacggtgcacctg
ccggtcgataccctcaatcaggtcgaggaggaggtcttcagctggcagattcccggtctg
cgtgaagacctcgtcaccgcgcttatccgttcgctgcccaagccgttgcgtcggaatttc
gtgccagcgcccgatgtggccgggaaggtacttgaaacccttgagccgtacgtcggcgat
atccgggtggcactcgccgccgaactggggcggctgagcggaatacaactcgaggcggaa
gatttcgacctgtcaaaggtgccggatcacttgttgctgaccttccgggtagtcgatgac
cgcaagaagaagctgcgcgaatcgaaagacctcggcaccctgcgcgccggcctggccccc
gcggtgcaggtatcgatatcccgggcggcgaccgggctggagaaaagcgggctgaccagc
tgggacttcggagaactgccggcagaattcgacagtaacagccacggccggcgggtacgc
ggatacccggcgctgatggacgacggcacttccgtgtcgcttcgggtgctggatcggaag
agctcggccgccgcggcaacctgggccggtgttcggcgcctggtacatctcggcgtgccc
agcccggttggatatgtgcagaagcacctcagcaaccaggagaagctcacctttgcccgc
gacagtgccggcgttcggaccttgctggatgactgtgctgtcgccgcgattgatcggttg
atggtggagttcggcctcgatccggaatccgaggcgctaccggttcgcgaggcgtcagat
tttgaggcgcttcgggttttcgtcgccgacagatatctggacgcgaccttcgacgtggtc
cggatcgtcgaacgagttctctccgccgcggcacggattgaccgcgcgatctcgaaaatc
aacagcttgtcccttgtgtccggtcttgccgatctgcgtgcccaggtcgatggcctgctg
cagcccggcttcgtggccgagacaggttggcagcaattgcagcacctgccccggtatctg
accgcggccgaacgacggctggataagctcaccgacaacgcggcgcgtgaccgtcagctg
atggaacgggtgcgcctgcaggctgatgccttcgagaaggcgaaggcgaaactgaagcca
ggtacgccgccgggagcgcgacttcggggcgtgcgctggatgcttgaggagctgagggtg
agtttcttcgcccaggagctgggcactgtctacccgatctcggaaaagaggatcgccaag
gcgctggccgaggcgcagtag
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