Salmonella enterica subsp. enterica serovar Schwarzengrund: SeSA_A0216
Help
Entry
SeSA_A0216 CDS
T00743
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sew
Salmonella enterica subsp. enterica serovar Schwarzengrund
Brite
KEGG Orthology (KO) [BR:
sew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sew03016
]
SeSA_A0216
Enzymes [BR:
sew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SeSA_A0216
Transfer RNA biogenesis [BR:
sew03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SeSA_A0216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ACF89536
UniProt:
A0A0N1QTY3
LinkDB
All DBs
Position
complement(224383..224913)
Genome browser
AA seq
176 aa
AA seq
DB search
MSEPKRLFFAIDLPDDARTQIIAWRAAHFASEDGRPVAAANLHLTLAFLGDVSNDKQRAL
AQLAGRIRQPGFTLHLDDAGQWLRSRVVWLGMRQPPRGLLQLANMLRAQAARSGCYQSPQ
PFHPHITLLRDASHTVAIPPPGFCWSFPVTSFALYASSYGQGRTRYAELQRWTLGE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccaaaacggctgttttttgcgattgacttacccgacgacgcgcgcacgcaa
attatcgcctggcgcgccgctcattttgcgtctgaagacggacgccccgtcgcagcggcg
aacctgcacctgacgctggcctttttaggcgacgtcagtaacgataagcagcgcgcgctt
gcgcaactggccggacgaattcgccagccgggctttacgctacatctggatgacgccggt
cagtggctgcgttcacgcgtggtgtggctggggatgcgccagccgccgcgcgggttgttg
cagttggctaatatgctgcgcgcgcaggccgcccgcagcggttgttaccaaagcccgcag
ccttttcacccgcatattacgctgctgcgcgacgccagccatacggtggctatcccgccg
ccgggcttttgctggtcatttccggtcacgtcatttgcgctttacgcctcttcgtatggg
caaggccgtacccgctatgccgagctgcagcgctggacgctgggcgaataa
DBGET
integrated database retrieval system
