Salmonella enterica subsp. enterica serovar Schwarzengrund: SeSA_A1761
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Entry
SeSA_A1761 CDS
T00743
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
sew
Salmonella enterica subsp. enterica serovar Schwarzengrund
Brite
KEGG Orthology (KO) [BR:
sew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sew03019
]
SeSA_A1761 (hrpA)
Enzymes [BR:
sew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SeSA_A1761 (hrpA)
Messenger RNA biogenesis [BR:
sew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SeSA_A1761 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_19
AAA_22
nSTAND3
T2SSE
nSTAND_NTPase5
NACHT
PhoH
ResIII
AAA_16
SLFN-g3_helicase
NTPase_1
DUF6145
Motif
Other DBs
NCBI-ProteinID:
ACF89384
UniProt:
A0A0N1QTK7
LinkDB
All DBs
Position
complement(1702074..1705994)
Genome browser
AA seq
1306 aa
AA seq
DB search
MLPKSFMTEQSTLTLQVLQQRLDALMLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEI
EQAAAQVALREAARPSITYPQNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKIC
MELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMT
DGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDP
ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDIL
IFMSGEREIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETS
LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE
DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA
ITADEQQTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP
VDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREW
QDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDADKQEYTGARNARFSI
FPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQG
AVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRA
EVEELEHKSRRRDILVDDDTLFEFYDQRISHDVISARHFDSWWKKISRETPDLLNFEKSM
LIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQ
IPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVT
VDREDWHWDQVPEHLKITFRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQ
SGLHIWSFGELPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLL
LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGF
TALHEKVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVY
RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPA
RREDDDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQITA
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccaagagctttatgactgaacaatctacgttgacgcttcaggtgttacagcag
cggctggatgcactgatgctgcgcgacaaacagcgctttgcgcgccgcctgcatggcgta
aagaaagtaaaaaatcctgatgcgcaacaggccattttccagacgatggcgaaagaaatt
gaacaggctgcggcgcaggtcgccctccgcgaagcggcgcgcccctcaatcacttatccg
caaaatctgcctgttagccagaagaaacaggacattctggaagcgatccgcgatcatcag
gtggtgatcgtggcaggggaaaccggttccggtaaaaccacccagttgccgaaaatttgt
atggagctgggacgcggaattaaaggacttattggacatactcagccgcgtcgcctggcg
gcgcgcaccgtcgctaaccgcattgccgaagagttgcaaacggagccaggcggctgcatc
ggctataaagttcgtttcagcgatcatgtcagtagcaacaccatggtcaaactgatgacg
gacggtatcctgctggcggaaatccagcaggacaggctattgatgcagtatgacaccatc
attattgatgaagcgcatgaacgcagcctgaatattgacttcttgctcggctatctgaaa
gagcttctgccgcgtcgccccgatctgaaagtgattattacctctgcgaccatcgacccg
gaacgtttctcgcgccactttaataacgcgccgattatcgaagtctctggccgaacgtat
cccgtagaagttcgttatcgccctatcgtggaagaggctgacgacactgaacgcgatcag
ctacaggcaattttcgacgctgttgatgaactggggcgtgaaagtcccggcgatattctg
atttttatgagcggagagcgggaaatccgcgataccgccgacgccctgaacaagctgaac
ttacggcataccgaagtgttgccgctgtatgcacgcttgtcgaacagcgaacagaaccgc
gttttccagtcgcacagcggacgccgtatcgtgctggcgactaacgtggcggaaacctcg
ctgacggtgccgggtatcaagtatgtgatcgatcctggcactgcgcgcatcagccgctac
agctaccgcactaaagtgcagcgcctgccgattgaaccgatctcacaggcttccgccaac
cagcgtaaagggcgttgcggacgcgtatcggaagggatctgcattcgtctgtattcggaa
gatgactttttgtcacgtccggaatttaccgacccggaaattctacgtaccaacctggcg
tcggttattttgcagatgaccgccctggggctgggtgacatcgctgccttcccgtttgtc
gaagcgccggataagcgcaatattcaggatggcgtgcgtttgttggaagagctgggggcg
attaccgccgacgaacagcaaacggcatataagctgacgccgctgggccgacaattatcc
cagctgccggtcgacccgcgcctggcgcgtatggttctggaagcgcaaaagcatggctgt
gtgcgcgaagcgatgatcattacttccgcactctctattcaggatccgcgcgagcgccca
gtggacaagcagcaggcttccgatgagaaacaccggcgcttccatgataaggagtccgat
tttctggcgtttgttaacctgtggaattacctcggcgagcaacaaaaggccctgtcgtcg
aatcaattccgccgtctgtgtcgcaccgactatctgaactatttacgcgtgcgtgagtgg
caggatatctatacccaactgcgtcaggtggtaaaagaactggggattccggtaaacagc
gaacccgcagagtaccgggaaattcacgttgcgttgttaacggggctgttgtcgcatatc
gggatgaaagatgccgataaacaagagtacaccggcgcgcgtaacgcccgattctctatt
ttccccggatccggtttattcaaaaaaccgccgaaatggacaatggtcgcagaactggtg
gagaccagccgtttgtgggggcgcatcgctgcccgcattgagccagaatgggtggaaccg
gtagcccagcacctgattaaacgttcatatagcgaaccgcactgggagcgggcgcaaggc
gcggtgatggcgacggaaaaggttactgtctacggtctgccgattgtcgccgcgcgcaag
gtgaattacagccagattgacccggcgttgtgtcgcgagttgttcatccgccatgcgctg
gtggagggggactggcaaacccgtcatgccttcttccgtgagaatctaaaattgcgtgcg
gaagtcgaggaacttgagcacaaatctcgccgccgcgatatcctggtggatgacgatacc
ctgtttgagttttatgaccagcgtattagccatgacgttatttccgcccgccactttgat
agttggtggaaaaaaatcagccgcgagacgccggatctgctcaactttgaaaaaagtatg
ctgattaaagaaggcgcggaaaaaatcagcaaactggattacccgaatttctggcaccag
ggcaatctcaagctgcgtttgagctatcaatttgaaccgggcgcggatgctgacggcgtg
accgtccatattccgttgccgctacttaaccaggttgatgagagcggttttgaatggcag
atcccagggttgcgccgtgaattagtgattgcgctgattaaatcgttgccaaaaccggta
cgtcgcaactttgttccggctccaaactatgctgaagcgtttttaggtcgcgtaacgccg
ctggagctgccgctgctggacgctctggagcgtgaactgcgccggatgaccggcgtcacg
gtcgaccgggaagactggcattgggatcaggtgcccgagcatctgaaaatcacgtttcgc
gtggtgaatgacaaaaacaagaaactgcaggaagggcgttcgctcgccgagcttaaaaat
gcgctgaaaggcaaagtgcaggagacgctctcggcggtggcggatgacggcatcgagcag
agcgggctgcatatctggagtttcggcgagctgccggaaagctacgaacagaaacgcggt
aattataaagtgaaggcgtggccggcgttagtggatgagcgtgacagcgtcgctatcaaa
ttgtttgataatccgctggaacaacaacaggcgatgtggtgcggtttacgccgtctgctg
ttgctcaatattccttcaccgattaagtatctgcatgagaaattgccgaataaagccaag
ctggggctgtactttaacccgtacggcaaagtactggagttgattgatgactgtatcgcc
tgcggggtagataagctgatagatgccaacggcggaccggtgtggagcgaagcaggtttc
accgcgctgcacgaaaaggttcgcgccgagctgaatgatactgtggtggatatcgcgaag
caggttgagcgcatcctgacgaccgtattcaatatcaataagcgtctgaaagggcgggtg
gatatgagcatggcgttggggctttccgatatcaaggcgcagatgagcggtctggtatac
cgtggttttgtgactggcaacggctttaaacgtctcggcgatacgctgcgttatctgcag
gcaattgaaaagcggctggagaaactggctgtcgatccgcaccgcgatcgggcgcaaatg
ctgaaagtcgaaagcgtccagcaggcgtggcaacaatggataaataaattgcctccagcg
cgtcgcgaagatgatgatgttaaagagatccgttggatgattgaagaactgcgtgtcagt
tatttcgcccaacagctcggtacgccttatcctatttccgataagcgtattttacaggcc
atggatcagattacggcctaa
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