Salmonella enterica subsp. enterica serovar Schwarzengrund: SeSA_A1830
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Entry
SeSA_A1830 CDS
T00743
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sew
Salmonella enterica subsp. enterica serovar Schwarzengrund
Brite
KEGG Orthology (KO) [BR:
sew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sew03016
]
SeSA_A1830 (rnb)
Enzymes [BR:
sew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SeSA_A1830 (rnb)
Transfer RNA biogenesis [BR:
sew03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SeSA_A1830 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
ACF91932
UniProt:
B4TX11
LinkDB
All DBs
Position
1771732..1773666
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVQH
EFKEGDWAVAEMRRHPLKGDRSFYADLTQYITFADDHFVPWWVTLARHNLEKEAPNGVAT
EMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELADGRLQLTVAIADPTAWIAEGSK
LDNAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALACRMIIAADGTIDDDIAF
FAATIESKAKLAYDNVSDWLENNGTWQPDNEGIAQQIRLLHRICLSRSEWRHHHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANLCAARVLRDKLGFGIYNVHTGFD
PANADALAALLKTHGLHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGEAIARPQEDITQQMAERRRLNRM
AERDVGDWLYARFLNDKAGTNTRFAAEIIDVSRGGMRVRLVDNGAIAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgctgaaggggtcgtaaaagccacggaaaaaggctttggcttccttgaggttgacgcg
caaaaaagctatttcattcctccgccgcagatgaaaaaagtgatgcatggcgatcgtatc
gtcgcggtcatccacacggaaaaagaacgggagtctgccgagccggaagaactgatcgaa
ccgttcctgacgcgctttgtgggaaaagttcagggtaaaaatgaccgcctgtccatcgtg
ccggatcatccgttgctgaaagacgcgattccctgccgcgccgcgcgcggcgttcagcat
gagttcaaagaaggtgactgggcggttgccgaaatgcgccgccatccgcttaaaggcgac
cgttcgttttacgccgatttaacgcagtacatcacctttgccgacgatcactttgttccc
tggtgggttacgcttgcccgccacaacctggaaaaagaagcgccgaacggcgtagcgacg
gagatgctggacgaagggctggagcgccaggatcttaccgcgctgaatttcgtcactatc
gatagcgccagcactgaagatatggatgacgcgctttatgctgaggaattagcggacggc
agactccagcttacggtggctatcgccgatcctaccgcctggattgccgaaggcagtaag
ctggataacgccgcgaaaattcgcgccttcaccaactacctgccgggcttcaatattcct
atgctgccgcgtgagctgtctgacgatctgtgctcgctgcgcgccaacgaagtgcgtccg
gcgctcgcctgtcgcatgataatcgccgcagacggcaccattgacgatgatatcgccttt
tttgcggccacgatcgaatcgaaggccaagctggcgtacgacaatgtctccgactggctg
gaaaataacggcacctggcagccggataacgaaggcattgcccagcagattcgtctgttg
caccgtatttgtctaagccgcagtgagtggcgtcatcatcatgcgttagtctttaaagac
cgcccggattaccgctttgtgcttggcgaaaaaggcgaagtactggatattgtggcggaa
ccgcgccgtatcgctaaccgtatcgtagaagagtcgatgatcgccgctaacctttgcgcc
gcgcgcgtactgcgcgataagctcggtttcggtatttacaacgtacatacgggcttcgat
cccgcgaatgccgacgcgctggccgcactgctgaaaacgcatggtcttcatgtcgatgcc
gaagaggtgctgacgctggaaggcttctgtaaactgcgtcgcgaactggatgcgcagccc
tccggtttccttgacagccgcattcgtcgcttccagtcttttgcggaaatcagcaccgag
ccggggccgcatttcggtcttggtcttgaggcttacgccacctggacctctcccatccgt
aagtatggcgatatgattaaccatcgcctgctgaaagcggtcatcaagggggaggctatt
gcgcgtccgcaggaagatatcacccagcaaatggcggaacgccgtcgcctgaaccgtatg
gcggagcgcgatgtcggcgactggttatatgcacgcttccttaacgataaggcggggaca
aatacccgtttcgcggcagaaattattgacgtcagccgcggtggtatgcgtgtgcgactg
gtcgataacggcgctatcgcctttatccctgccccgttcctgcacgccgttcgcgatgaa
ctggtatgcagccaggaaaacggtacggtacagattaaaggtgagacggtttataaagtg
acggatgtcattgatgtcactattgcggaagttcgcatggaaacccgcagcattattgcc
cgaccggcagcgtaa
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