Salmonella enterica subsp. enterica serovar Schwarzengrund: SeSA_A1846
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Entry
SeSA_A1846 CDS
T00743
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sew
Salmonella enterica subsp. enterica serovar Schwarzengrund
Brite
KEGG Orthology (KO) [BR:
sew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sew03032
]
SeSA_A1846 (topA)
03400 DNA repair and recombination proteins [BR:
sew03400
]
SeSA_A1846 (topA)
Enzymes [BR:
sew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SeSA_A1846 (topA)
DNA replication proteins [BR:
sew03032
]
Prokaryotic type
DNA Topoisomerases
SeSA_A1846 (topA)
DNA repair and recombination proteins [BR:
sew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SeSA_A1846 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
MetOD1
Motif
Other DBs
NCBI-ProteinID:
ACF88654
UniProt:
A0A0N1TUI2
LinkDB
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Position
complement(1787171..1789768)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPK
KDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDARYSRVVFNEITKNAIRQAFEQPGELNINRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDANTTTPSGEALPLQVTH
QNDKPFRPVNREQTLAAVSLLEKASYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYIGDNFGKKYLPDNPNQYASKEN
SQEAHEAIRPSDVAVMAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGEF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDALTLLELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMEDSLDQVANHQAEWKAVLDNFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKDGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgtcatcgttgagtccccggcaaaagccaaaacgatcaacaagtat
ctgggtaatgactacgtggtgaaatccagcgtgggtcatatccgtgatttgccgaccagt
ggctcagcagctaaaaagagcgccgactctacctccaccaaaacggctaaaaagcccaaa
aaggatgaacgtggcgctctcgtcaaccgtatgggggttgatccgtggcacaactgggat
gcgcactatgaagtgctgcccggtaaagagaaggtcgtctctgaactgaaacagttggcg
gaaaaagccgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcacctgcgggaagtgatcggcggcgatgacgcgcgctacagtcgcgtagtctttaac
gaaataaccaaaaatgccattcgccaggcgtttgaacagccgggcgagctgaacattaac
agggtcaacgcccagcaagcgcgccgctttatggaccgcgtggtaggctatatggtctcg
ccgttgctgtggaaaaagatcgcccgtggtttgtcggcaggtcgcgttcagtctgtcgcg
gtccgtctggtcgttgagcgcgagcgcgagattaaagcgtttgttccggaagagttctgg
gaaattgacgctaatacgacgacgccgtctggcgaggcgctaccgctacaggtcacgcat
cagaacgacaagccattccggccggtaaatcgcgagcagacgcttgccgccgtcagcttg
ctggaaaaagccagctatagcgtgctggagcgagaagacaagccgaccagcagcaagcca
ggcgcgccgtttatcacctccacgctacagcaggcggccagcacccggctgggctttggc
gtgaagaaaaccatgatgatggcgcagcgtctgtatgaggcgggctacatcacctatatg
cgtacagactccaccaacctgagtcaggatgcggtcaacatggtgcgcggttatattggc
gataatttcggcaagaaatacctgccggataacccgaaccagtacgccagcaaagaaaac
tctcaggaagcgcacgaagcgatccgtccttccgacgttgctgtcatggcggagtcgctg
aaagacatggaggctgacgcgcagaagttgtatcaactaatttggcgtcagtttgtcgcc
tgtcagatgacgccagcacaatatgactctactacgcttaccgttggcgcaggcgagttc
cgcctgaaagcgcgtgggcgtattttgcgctttgacggctggacaaaagtgatgccggcg
ctgcgtaaaggcgatgaagatcgcacattgcctgccgtgaataagggcgatgcgctgacg
ctacttgaattgacgcctgctcagcactttactaaaccgccagcccggtttagcgaggct
tctctggttaaagagcttgagaagcgcggtattggtcgtccgtctacctatgcgtcgatt
atctcgaccattcaggatcgcggctatgttcgcgttgaaaaccgtcgtttctatgcggaa
aaaatgggtgaaatcgtcaccgatcggctggaagaaaacttccgcgaattgatgaactac
gattttaccgcgcagatggaagatagtctggatcaggttgcaaatcaccaggccgagtgg
aaagcggtactggataacttcttcagcgattttactcagcagctcgataaagccgagaaa
gatccggaagaaggggggatgcgccctaaccagatggtgctgaccagcatcgactgtcca
acctgtggccgtaaaatgggaattcgtactgccagtacgggggttttccttggatgttca
ggttatgcgctttcgccgaaagagcgttgtaaaacgaccattaacctggtgccggaaaat
gaagttctgaacgtgctggaaggcgacgacgccgaaaccaacgccctgcgcgccaagcgt
cgctgtcagaagtgtggtacggcgatggacagctatctgatcgatccgaagcgtaaattg
catgtgtgtggtaataacccgacctgtgacggctacgagattgaagaaggcgagttccgc
atcaaagggtatgacggtccgatcgttgagtgtgagaaatgtggttccgaaatgcacctg
aaaatggggcgttttggtaagtacatggcctgtactaacgacgaatgtaaaaacacccgt
aagatcttgcgtaacggcgaagttgcgccgccgaaggaagatcctgttccattgccggaa
ctgccgtgtgaaaaatcggacgcgtactttgtgctgcgcgatggcgccgcagggatattc
ctggcggccaacacgttcccgaaatcacgcgaaacgcgcgcgccattagtcgaggagctt
taccggttccgcgatcgcctgccggaaaaactgcgttatctggcggatgcgccgcagcag
gatccagaaggtaataaaaccgttgttcgctttagccgcaaaacaaaacagcagtacgtt
gcggcggaaaaagacgggaaggcgacgggatggtcagcgttcttcgtcgacggcaagtgg
gttgaaggcaagaaataa
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