Salmonella enterica subsp. enterica serovar Schwarzengrund: SeSA_A3116
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Entry
SeSA_A3116 CDS
T00743
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sew
Salmonella enterica subsp. enterica serovar Schwarzengrund
Brite
KEGG Orthology (KO) [BR:
sew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sew03009
]
SeSA_A3116 (rumA)
Enzymes [BR:
sew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SeSA_A3116 (rumA)
Ribosome biogenesis [BR:
sew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SeSA_A3116 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
RrnaAD
Methyltransf_11
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
Methyltr_RsmB-F
Methyltransf_23
Methyltransf_12
FtsJ
Methyltransf_4
Ubie_methyltran
Methyltransf_15
Methyltrans_SAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
ACF88641
UniProt:
A0A0N1QS16
LinkDB
All DBs
Position
complement(3009441..3010736)
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AA seq
431 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVILTEDKKQ
FARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDII
AGEPWGYRRRARLSLNCLPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLEALLPRIRACLA
SLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILET
VSGEAPWYDSHGLRLAFSPRDFIQVNEVVNQQMVARALEWLDVRAEDRVLDLFCGMGNFT
LPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVL
LDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTG
HLESMVLFERM
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacggcgcgtgacgacgcgtcagatcataaccgttaaa
gtcaatgacctcgattcatttggtcagggcgtagcccgtcataacggaaaggcgctgttt
atccccggtttattgcctgaggaaagcgcagaagtcattcttacagaagataaaaagcaa
tttgcccgcgcacgcgtttcgcgccgtttgaatgatagcccggaacgagaaacgccgcgc
tgcccgcattttggcgtctgtggcggttgtcagcagcagcatgtcagcatcgccctgcaa
caacgcagcaaaagcgcggcgctggcgcgtttgatgaaacacgaggtgaatgacatcatc
gccggcgagccctggggttatcggcgtcgtgcgcggttaagtctgaattgcctgccggat
aaaccgctgcaaatgggatttcgcaaagcgggttccagcgatatcgtcaatgtcgaacag
tgccctgttttggcgccccagcttgaagcattgctgccccgaatcagggcgtgtctggcg
agtttacacggcacccgacatcttgggcatgttgagctggtacaggcgggaagcggtacg
ctgatgattctgcgccataccgcgccattgagtgcggcggataaagaaaaactggaacgc
ttttcgcattctgagggattgtctctgtttctggcgccgtttagcgagatactggaaacg
gtatctggcgaagcgccctggtatgattcgcacggcttacgtttagccttcagtccgcga
gactttattcaggttaatgaggtggtaaaccagcaaatggtcgcacgcgcgctggagtgg
cttgatgtgcgcgccgaggatcgtgtcctggatctgttctgcggaatggggaattttacg
ctgccgctggcaacgcgcgcggcaagcgtggtaggggttgagggcgttccggcgctggta
gaaaaaggccgtgaaaacgccatccgcaatggtttacataatgtgacattcttccatgag
aacctggaggaagatgtcacgaagcagccgtgggcgaaaaacggctttgacaaagtctta
ctcgatcctgcgcgtgcgggggctacaggagtgatgcgacatattataaaattaaaacct
attcgcattgtttatgtatcctgtaacccggcgacgctggcgcgcgatagtgaagcgctg
gtcaatgcgggatatgaggttacgcgtttagcgatgctcgacatgttcccgcacacagga
catctggaatcaatggttctgttcgagcgcatgtaa
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