Salmonella enterica subsp. enterica serovar Schwarzengrund: SeSA_A4128
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Entry
SeSA_A4128 CDS
T00743
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sew
Salmonella enterica subsp. enterica serovar Schwarzengrund
Pathway
sew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SeSA_A4128 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sew03021
]
SeSA_A4128 (rho)
03019 Messenger RNA biogenesis [BR:
sew03019
]
SeSA_A4128 (rho)
Transcription machinery [BR:
sew03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SeSA_A4128 (rho)
Messenger RNA biogenesis [BR:
sew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SeSA_A4128 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ACF91153
LinkDB
All DBs
Position
4004244..4005503
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGESMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaagt
atggggctggaaaacctggcccgtatgcgcaagcaggacattatttttgccatcctgaag
cagcacgcaaagagtggcgaagatatctttggcgacggtgtgctggagatattgcaggat
ggatttggtttcctccgttctgcagacagctcctacctcgccggtcctgatgatatctac
gtttcccccagccaaatccgccgtttcaacctccgcactggtgataccatttctggtaag
attcgcccgccgaaagaaggtgaacgctattttgcgctgttgaaagttaacgaagttaac
tacgacaaaccggaaaacgcccgtaacaaaatcctctttgagaacttaaccccgctgcac
gcaaactctcgtctgcgtatggagcgtggtaacggttctaccgaagacttaacggcacgc
gttctggatctggcttcgccgatcggtcgcggccagcgcggtctgattgtcgcgccgccg
aaggcgggtaaaaccatgctgctgcagaacatcgcgcagagcatcgcgtataaccaccca
gactgcgtgctgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggcgaagtggttgcgtctacctttgacgaaccggcatcccgccacgtt
caggttgccgaaatggttatcgagaaggcgaaacgtctggttgaacacaagaaagacgtt
atcatcctgctcgactccatcacccgtctggcgcgtgcctataacaccgtggtgccggct
tccggtaaagtactgaccggtggtgtggacgctaacgccctgcatcgtccgaagcgtttc
ttcggcgcggcgcgtaacgtggaagagggcggtagcctgacgatcatcgcgacggcgcta
atcgataccggttccaagatggacgaagttatctacgaagagtttaaaggcaccggtaac
atggagctgcatctctcgcgtaagatcgctgaaaaacgtgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgctcaccactcaggaagagctgcagaaaatg
tggatcctgcgtaaaatcatccatccgatgggtgaaattgacgcgatggaattcctcatt
aacaaactggcgatgaccaaaactaatgacgactttttcgagatgatgaagcgctcataa
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