Salmonella enterica subsp. enterica serovar Typhi P-stx-12: STBHUCCB_30590
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Entry
STBHUCCB_30590 CDS
T01741
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sex
Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Pathway
sex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STBHUCCB_30590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sex03400
]
STBHUCCB_30590
Enzymes [BR:
sex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
STBHUCCB_30590
DNA repair and recombination proteins [BR:
sex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STBHUCCB_30590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AEZ46704
LinkDB
All DBs
Position
complement(2976174..2979662)
Genome browser
AA seq
1162 aa
AA seq
DB search
MIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATEELRGRIRSN
IHELRIACLRESTDNPLYARLLEEISDKKQAAQWLLLAERQMDEAAVFTIHGFCQRMLSL
NAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIAQVVFDVWKGPKALLKDIDR
YLQGEAPVIKAPPSQEETLASRHEQILARINQVKQQWCEAVSELDALIESSGIDRRKFNR
GNQAKWIEKITAWAQEETKNYQLPEALGKFSQRFLAERTKAGGVTPQHPLFVAIDNLLGE
PLSIKDLVLTRALSEIRGTVAQEKRRRGELGFDDMLSRLDTALRSESGEALAAAIRTRFP
VAMIDEFQDTDPQQYRIFRRIWRHQPDTALLLIGDPKQAIYAFRGADIFTYMKARSEVSA
HYTLDTNWRSAPGMVNSVNKLFSQMNDAFMFRDIPFSPVKFAPRNQSLQFKVNDAPQPAM
TLWLMEGESCGSGDYQSYMAQVCATQIRDWLRAGQTGDALLTNGDSSRPVRASDISVLVR
SRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVLQAVMAPERENTLRSALATS
MMGLTALDIETLNNDENAWDAVVEEFDGYRQIWHKRGVMPMLRALMSARNIAENLLATAG
GERRLTDILHISELLQEAGSQLESEHALVRWLAQHILEPDSNASSQQLRLESDKHLVQIV
TIHKSKGLEYPLVWLPFITHFRVQDQAFYHDRHSYEAVLDLSHAEESIALAEAERLAEDL
RLLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGRLLQKGEPMDAAGLRACIEA
LCDEDIVCRTPGNTDNDRWQIAAASHAELSARTLQRLLYDSWRVTSYSGLQQRGHSVAQD
LIPRLDIDAAGVGEAAEAPAMTPHHFPRGASPGTFLHSLFEELDFTQPIDPQWVQEKLEL
SGFETRWEPVLTRWLDTVLHVPLNETGVSLSVLTEREKQVEMEFYLPIAQPLTAGELDAL
IRRYDPLSAGCPALDFMQVRGMLKGFIDLVFRYEGRYYLLDYKSNWLGEDSAAYTQTAMA
AAMQAHRYDLQYQLYTLALHRYLRHRMANYDYERHFGGVIYLFLRGVDSERPQQGIFTTR
PAAALINQLDDMFAGEMSEEAQ
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttgattgaagcatcagcgggcacaggcaaaacgtttactatcgcggcgctgtatctgcgg
ctactgctcggtttaggcggcagcgccgcatttccccgtccgttgaccgttgaagaactg
ctggtggtaacctttacggaggccgccactgaagagctgcgtgggcgaatccgcagtaat
atccatgagttgcgcatcgcctgtctgcgggaaagcacggataatccgctgtatgcccgc
ttgctggaagaaattagcgacaaaaagcaggccgcgcagtggttattactggcagaacga
caaatggacgaggccgcggtttttaccatccacggtttttgccagcgtatgctcagcctg
aacgctttcgaatccggtatgttgtttgagcaacagcttattgaagacgaatctttgttg
cgttatcaggcctgcgccgatttctggcggcgtcattgctatccgctgccgcgcgacatc
gcgcaggtggtgtttgacgtgtggaaggggccgaaggcgctcttaaaagatatcgatcgt
tatctgcagggcgaagcgccggtcattaaagcgccgccatcgcaggaggagacgctggca
tcgcgccatgaacagatcctggcgcgcatcaaccaggtgaagcagcagtggtgtgaggcg
gttagcgagctggacgcgctgatcgaatcatccggcatcgatcgcagaaaattcaaccgc
ggcaatcaggcgaaatggatcgaaaagatcaccgcgtgggcgcaagaagagaccaaaaat
tatcaattacccgaggcgttgggaaaattttcacagcgttttttagctgagcgcaccaaa
gctgggggcgtgacgccccagcacccattgtttgtcgccattgataacctgttgggcgaa
ccgctatcgattaaagatctggttcttacccgagcgctctcagagatccgtggaacggtg
gctcaggaaaaacgacggcgcggcgagctggggtttgacgatatgctcagccgtttagat
accgcgctgcgtagtgaaagcggcgaggcgctggctgcggcgattcgtacccgttttccg
gtggcgatgatcgatgaatttcaggataccgacccacaacagtaccgtatttttcgccgt
atctggcgacatcaacccgatacggcgctattgctgattggcgatcctaaacaggcgatt
tatgcgtttcgtggcgcggatatctttacctacatgaaggctcgcagcgaagtgagcgcg
cactatacccttgacactaactggcgctccgcgccggggatggtgaatagcgttaacaag
ctgttcagtcagatgaatgacgcctttatgttccgcgatattcccttcagtccggtaaag
tttgcgcccagaaaccagtcgctgcaatttaaagtgaatgacgcgcctcaaccggcgatg
accctgtggctaatggagggggaaagctgcggttcgggcgattatcaaagttatatggcg
caggtgtgcgccacgcaaattcgcgactggctgcgtgccgggcaaacgggcgacgcgctg
ctgacgaacggcgattcgtcgcggcccgttcgcgcctcggatattagcgtgctggtgcgc
agcaggcgggaagccgcgctgatacgggatgcgctgaccttactggcgatcccctccgtc
tatctttctaaccgcgacagcgtattcgaaacgctcgaagcgcaggaaatgctgtgggtg
ttgcaggcggtgatggcgcccgaacgtgagaatacgctgcgtagcgctctggcgacatca
atgatgggccttaccgcgctggatatcgaaacgcttaacaatgatgaaaatgcgtgggat
gcggttgttgaagagtttgatggctaccgacagatttggcataaacgcggcgtgatgcct
atgctgcgcgcgctaatgtcggcgcgcaatattgctgaaaacctgctggcgacggcggga
ggtgaacgtcggctgacggatattctgcatattagcgaactgttacaggaagccggttcg
cagctggaaagcgaacatgcgctggtgcgttggctggcgcaacatatccttgaacctgat
agcaatgcttccagccagcaactacgtctggaaagcgataagcatctggtgcaaatcgtc
accattcataaatcgaaaggtctggaatacccgctggtctggttaccttttatcacccat
ttccgcgtgcaggaccaggctttttatcacgacaggcactcctacgaggcggtgctggac
cttagtcacgccgaagagagcatagcactggcggaagccgaacgcctggcggaagacctg
cgcctactttatgtcgcgctgacccgtgcagtgtggcattgcagcctcggcgtcgcgccg
ctggtgcggcgtcgtagcgataagaaaggcgagacggatgtgcaccaaagcgcgcttggg
cgactcctgcaaaaaggcgaaccgatggatgccgcaggccttcgcgcctgtattgaggcg
ctatgcgacgaggatatcgtgtgtcgaacgccaggcaatacggataacgaccgctggcaa
attgccgctgcatcgcacgcggaactcagcgccagaacgctgcaacgcctgctttatgat
agctggcgcgtcaccagttattccggtttgcagcagcggggacatagcgtggcgcaagat
cttattcctcgtctcgacattgacgccgcaggcgttggcgaagcggcggaagcgccggca
atgacgccgcatcactttcctcgcggggcatcgccgggaacatttttgcacagcctgttt
gaagagcttgattttactcaaccgatagacccccaatgggtacaggaaaaactggagctg
agtggttttgaaacgcgatgggagcccgtacttacccgctggctggacaccgtgttgcac
gttccccttaacgagacgggcgttagtctgagcgtgctgaccgagcgtgaaaaacaggtt
gaaatggagttttatctgccgattgcccagccgcttaccgccggagagttagatgcgttg
attcgtcgatacgacccgctttcagcaggttgccctgcgctggatttcatgcaggttcgc
ggcatgttaaagggctttatcgacctggtgttccgttatgaggggcgctattacctgctc
gactataaatctaactggctgggcgaggatagcgccgcttatacccagacggcgatggct
gcggcgatgcaggcgcatcgctatgatttgcagtaccagctttatacgctggcattgcat
cgttaccttcgtcatcgaatggcgaattacgactatgaacgccatttcggcggcgtcatc
tatctctttttacgcggggtggatagcgaacgtccgcagcagggtatttttaccactcgt
cctgcggcggcgttaattaaccaactggatgatatgtttgcaggtgaaatgagtgaggag
gcgcaatga
DBGET
integrated database retrieval system
