Salmonella enterica subsp. enterica serovar Typhi P-stx-12: STBHUCCB_33840
Help
Entry
STBHUCCB_33840 CDS
T01741
Name
(GenBank) hypothetical protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sex
Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Pathway
sex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STBHUCCB_33840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sex03019
]
STBHUCCB_33840
03016 Transfer RNA biogenesis [BR:
sex03016
]
STBHUCCB_33840
Enzymes [BR:
sex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
STBHUCCB_33840
Messenger RNA biogenesis [BR:
sex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STBHUCCB_33840
Transfer RNA biogenesis [BR:
sex03016
]
Prokaryotic type
tRNA degradation factors
STBHUCCB_33840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
S1_2
KH_2
aRib
KH-I_KHDC4-BBP
S1_RRP5
KH_SLS1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AEZ47008
LinkDB
All DBs
Position
complement(3279193..3281358)
Genome browser
AA seq
721 aa
AA seq
DB search
MPSKIGKDIILLNPIVREFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKA
KPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNE
VQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDEL
KESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPR
WDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDA
NELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQA
LVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRG
VLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVK
EGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGAR
LHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIE
DDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRIYNSKVTRIVDFGAFVAIGGGKEGLVH
ISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQA
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtcaaaaattggaaaggatattattttgcttaatccgatcgttcgtgaattccag
tacggccagcataccgttacgctggaaactggcatgatggcgcgtcaggccactgccgct
gttatggtaagcatggatgacaccgccgtattcgttaccgttgtcggccagaaaaaagcc
aagccaggccaggacttcttcccactgaccgttaactatcaggagcgtacctacgctgct
ggtcgtatcccgggcagcttcttccgtcgtgaaggccgtccaagcgaaggcgaaaccctg
atcgcgcgtctgattgaccgcccggttcgtccgctgttcccggaaggtttcgttaacgaa
gtgcaggttattgcgaccgtcgtttccgttaacccgcaggttaacccggatatcgtggcg
atgatcggcgcatccgctgcgctgtcgctgtccggcattccgttcaacggcccaatcggc
gcggcgcgcgtaggttacatcaatgaccagtacgtactgaacccgacccaggacgagctg
aaagaaagcaagctggacctggtggttgccggtaccgaagcggctgtgctgatggtggaa
tccgaagctgaactgctgagcgaagacactatgctgggcgcggtggtattcggtcacgag
cagcagcaggttgttatccaggcgatcaacgatctggtgaaagaagccggtaaaccgcgt
tgggactggcagccggaagccgtcaacgacgcgttgaacgcgcgtgttgctgcgctggct
gaatctcgtctgagcgacgcgtaccgcatcaccgataaacaagagcgctatgctcaggtt
gacgtaatcaaatccgaaaccatcgagcagcttattgcagaagatgaaactctggatgct
aacgagctgggtgaaatcctgcacgccatcgagaaaaacgtggtacgtagccgcgtactg
gcaggcgagccgcgtattgatggccgtgaaaaagacatgatccgtggtctggacgtgcgc
actggcgtactgccgcgaactcacggttccgctctgtttacccgtggtgaaacgcaggcg
ctggttaccgcgactctgggtactgcccgtgacgcgcaggtgcttgatgaactgatgggc
gagcgcactgacagcttcctgttccactacaacttccctccgtactccgtaggcgaaacc
ggcatggtcggttctccgaagcgtcgtgaaattggtcacggtcgtctggcgaagcgcggc
gtgctggcagtgatgccggacatggataaattcccgtacaccgttcgcgtggtgtctgaa
atcaccgaatccaacggttcttcttctatggcttccgtgtgcggcgcttctctggcgctg
atggacgctggcgtgccaattaaagccgccgtagcaggtatcgctatgggtctggtgaaa
gaaggcgacaactacgttgtactgtctgacattctgggcgacgaagatcacctgggcgat
atggacttcaaagtggcgggttcccgcgacggtatctctgcgctgcagatggatatcaaa
attgaaggtatcaccaaagagatcatgcaggttgcgttgaaccaggctaaaggtgcgcgt
ctgcacatcctgggcgtgatggaacaggcgatcaacgcgccgcgcggcgatatctctgaa
tttgcgccgcgtatccataccatcaagatcagcacggacaagatcaaagacgtgatcggt
aaaggcggttctgtgatccgcgcgctgactgaagagaccggcaccaccatcgaaattgaa
gatgacggtactgtgaagatcgcggcgaccgacggtgaaaaagcgaaatacgctatccgt
cgtatcgaagagatcaccgcagagatcgaagtcggccgtatctacaatagtaaagtgacc
cgtatcgttgactttggcgcgtttgttgccatcggcggcggtaaagaaggtctggttcac
atctctcaaatcgcggataagcgtgtagagaaagtgaccgattatctgcagatgggtcag
gaagtcccggttaaggttctggaagttgaccgccagggccgtgtacgtctgagcattaaa
gaagcaaccgagcagtctcaacctgcggctgcgccggaagctccggcgagcgaacaggcc
gagtaa
DBGET
integrated database retrieval system
