Salmonella enterica subsp. enterica serovar Typhi P-stx-12: STBHUCCB_3810
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Entry
STBHUCCB_3810 CDS
T01741
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sex
Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Pathway
sex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
STBHUCCB_3810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sex03400
]
STBHUCCB_3810
Enzymes [BR:
sex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
STBHUCCB_3810
DNA repair and recombination proteins [BR:
sex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
STBHUCCB_3810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
PhaP_Bmeg
Motif
Other DBs
NCBI-ProteinID:
AEZ44125
LinkDB
All DBs
Position
complement(412564..413913)
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AA seq
449 aa
AA seq
DB search
MLSSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRC
AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAK
LHAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDD
APGQIVRAIELANTRGECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHET
DVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRRFTQIF
HRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQPRIHRV
QSRIQQLEYRLTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKI
KQVKAGDIMTTRLEDGWLESEVKSVTPGT
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttatcctctcaaacttcctcaatttttaccgtaagccgccttaaccagacggttcgt
ctgctgttagaacaggagatgggacaggtatggatcagcggcgagatttctaatttcacg
cagcctgcgtcgggccactggtactttacgctcaaagacgataccgctcaggtgcgctgt
gcgatgttccgcaacagcaaccgccgggtgacgttccgcccgcagcacgggcagcaggtg
ctggtacgcgccaacattacgctgtacgagccgcgcggcgattatcaaatcatcgccgaa
agtatgcagccggctggcgaaggcttgttgcagcagaagtatgagcagctaaaagccaaa
ctccatgccgaaggcttgttcgatcagcagcataaacagccgttgccctccccggcccac
tgcgttggggtgatcacctcgaaaaccggcgcggcgctgcacgatatcctccacgtgttg
aagcgtcgtgacccatccctgcccgttattatctatccaaccgcggtacagggcgacgat
gcgccggggcagatcgttcgtgctatcgaactggcaaacacgcgcggcgagtgcgacgtg
ctgatcgtcggacgcggcggcggttcgctggaagatttgtggagttttaacgacgaacgc
gtggcgcgggctatttttgccagccgtattccggtggtcagcgccgtcggtcacgaaacc
gacgtcactatcgccgattttgtcgccgacctgcgcgcgccgacgccatcagcagcggca
gaaattgtcagccgtaaccagcaggagttgttgcgtcagatccagtccgcccagcagcgt
ctgggcatggcgatggactactacctcgccaaccgcagccgtcgtttcacgcagattttt
caccgtctgcaacaacaacatccgcaactacgtctggcccgtcagcaaaccgcgctggaa
cgtctacgccaacggatgggatttgcgcttgaggccaggattaagcaggccactcagcgt
cagcaacgcgtaagtcaacgcctgagccagcaaaatccgcagccgcgcattcaccgcgtg
cagtcgcgcatccaacagctggaatatcgtctgacggagaatatccgctcacggttaagc
gaacagcgcgagcgttttggcaacgcggtcacgcatctggaagcggtcagcccgttagcc
acgctggcgcgcggctatacggtttcgacgacaacggacggcaaggtgttgaaaaagatc
aaacaggtcaaagcaggcgatatcatgaccacgcggctggaggacggctggcttgaaagt
gaagtcaaatccgtcacgccgggaacgtaa
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