Salmonella enterica subsp. enterica serovar Typhi P-stx-12: STBHUCCB_46360
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Entry
STBHUCCB_46360 CDS
T01741
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sex
Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Pathway
sex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STBHUCCB_46360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sex03019
]
STBHUCCB_46360
03110 Chaperones and folding catalysts [BR:
sex03110
]
STBHUCCB_46360
03029 Mitochondrial biogenesis [BR:
sex03029
]
STBHUCCB_46360
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sex04147
]
STBHUCCB_46360
Enzymes [BR:
sex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
STBHUCCB_46360
Messenger RNA biogenesis [BR:
sex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
STBHUCCB_46360
Chaperones and folding catalysts [BR:
sex03110
]
Heat shock proteins
HSP60 / Chaperonin
STBHUCCB_46360
Mitochondrial biogenesis [BR:
sex03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
STBHUCCB_46360
Exosome [BR:
sex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
STBHUCCB_46360
Exosomal proteins of other body fluids (saliva and urine)
STBHUCCB_46360
Exosomal proteins of breast cancer cells
STBHUCCB_46360
Exosomal proteins of colorectal cancer cells
STBHUCCB_46360
Exosomal proteins of bladder cancer cells
STBHUCCB_46360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEZ48199
LinkDB
All DBs
Position
4522589..4524235
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKIADLKGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKSDAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtgaaagtaaccctcggtccgaaaggccgtaacgtggttctg
gataaatctttcggtgcgccgactatcactaaagatggtgtttccgtagcgcgtgaaatc
gagctggaagacaagtttgaaaacatgggcgcgcagatggtgaaagaagttgcctctaaa
gcgaacgacgctgcaggcgacggcaccaccaccgcgaccgtactggcgcagtccatcatt
accgaaggcctgaaagccgttgctgcgggcatgaacccgatggacctgaaacgtggtatc
gacaaagcggttgctgctgcggttgaagagctgaaggcgctgtccgtaccgtgctccgac
tctaaagcgattgctcaggtaggtactatttccgctaactccgacgaaaccgtaggtaaa
ctgatcgcggaagcgatggataaagtcggtaaagaaggcgtcatcactgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagtttgaccgcggctacctg
tctccttacttcatcaacaagccggaaactggcgcagtagaactggaaagcccgttcatc
ctgctggctgataagaaaatctccaacatccgcgaaatgctgccggttctggaagccgtt
gcaaaagcaggcaaaccgctgctgatcatcgctgaagatgttgaaggcgaagcgctggct
accctggtagtgaacaccatgcgtggcatcgtgaaagtggctgcggttaaagcaccgggc
ttcggcgatcgtcgtaaggcgatgctgcaggatatcgctaccctgaccggcggtaccgta
atctctgaagagatcggtatggagctggaaaaagcaaccctggaagacctgggtcaggcg
aaacgtgttgtgatcaacaaagacaccaccaccatcattgatggcgtgggtgaagaagct
gccatccagggccgtgttgctcagatccgtcagcagattgaagaagcgacctccgactac
gatcgtgaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgcggtaatcaaa
gttggcgctgcgaccgaagttgaaatgaaagagaagaaagcccgcgttgaagatgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgctggtggtggcgttgcgctgatc
cgcgttgcttctaaaattgctgacctgaaaggccagaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcaatggaagctccgctgcgtcagatcgtgctgaactgcggcgaa
gagccgtctgttgtcgctaacaccgttaaaggcggcgacggtaactacggttacaacgca
gcaactgaagaatacggcaacatgatcgatatgggtatcttggacccaaccaaagttacc
cgttctgcgctgcaatacgcggcttctgtggctggtctgatgatcactaccgagtgcatg
gtgaccgacctgccgaaaagcgatgctcctgatttaggcgctgctggcggcatgggtggt
atgggtggtatgggcggcatgatgtaa
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