Salmonella enterica subsp. enterica serovar Typhi P-stx-12: STBHUCCB_46530
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Entry
STBHUCCB_46530 CDS
T01741
Name
(GenBank) putative mscS family protein
KO
K22051
miniconductance mechanosensitive channel
Organism
sex
Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Brite
KEGG Orthology (KO) [BR:
sex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sex02000
]
STBHUCCB_46530
Transporters [BR:
sex02000
]
Other transporters
Pores ion channels [TC:
1
]
STBHUCCB_46530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AEZ48216
LinkDB
All DBs
Position
complement(4536799..4540125)
Genome browser
AA seq
1108 aa
AA seq
DB search
MRLIIAFLMAWCLSTGAFAATAPDAKQITQELEQAKAAKPAQPEAVEALQTALNALEERK
GSLERAKQYQHVIDNFPKLSATLRAQLNNLRDEPRSVPPEMSTEALNQEILQVSSQLLDK
TREAQQEQERVREIADSLSQLPQQQNDARRQLNEIERRLGAAGGSAALSQAQSLSMQAES
AKLKALVDELELAQLSANNRQELARLRSELAEKQSQQLDAYLQALRNQLNSLRQREAERA
LESTELLAENSAGLPEGIVEQFKVNRGLSQALNQQAQRMDLVASQQRQATSQTLQVRQAL
NTLREQSQWLGVSNMLGEALRAQVARLPEMPKPQQLDTEMAQLRVHRMRYEELLNKQPQL
RQIRQANGQPLTAEQNQILDAQLRTQRELLNSLLQGGDTLILELTKLKVSNSQLEDALKE
VNEATHRYLFWTADVSPLSLSWPVDLVQDLRRLISLDTFNQLGKASIMMLTSKETLLPLF
GALALVGFSLYSRQHFNRFLERSASRVGKVTQDHFSLTLRTVFWSILVASPLPVLWATLG
YGLQEAWPYPLAVAIGDGVTATVPLLWVVMICAAFARPNGLFVAHFGWPRNRVAKAMRYY
LMSIGLIVPLIMAVIMFDNLNDREFSGSLGRLCFILICGALALVTLSLKKAGIPLYLDKE
GNGDNMVNSLLWNMLMGAPLIAILAAAVGYLATAQALLARLETSVAIWFLLLVIYHVIRR
WMLIQRRRLAFDRAKHRRAEMLAQRARGEEEPAHSSSLEGAVDIDESEIDLDAISAQSLR
LVRSILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILV
FIITTQLVRNLPALLELALLQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKL
QWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTIS
DWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTQILLTAAQRCSLV
LDNPPPEIFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFREHGIDMPFPPFQ
MRLESLGGKQTGRTLTSAGKTSRPAGSL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgattatcgcttttctgatggcctggtgcctcagcacgggggcgttcgccgca
acggcccccgacgccaaacaaatcacgcaggaactggagcaggcaaaagcggcgaaaccc
gctcagccggaagccgttgaggcgctccagactgcgttaaacgcgcttgaagagcgaaaa
ggctcgcttgagcgcgcgaaacaatatcaacacgttattgataatttccctaagctatcc
gccaccttgcgcgcccagttgaataatctgcgcgatgaacctcgcagcgtaccgccagag
atgtccaccgaagcgttaaatcaggagatcttgcaggttagcagccagctactggataaa
acccgcgaggcgcaacaggagcaggagcgcgtcagggagatcgccgactcgctcagccag
cttccccaacagcaaaacgacgcccgccgccagcttaatgagattgagcgacgactcggc
gccgcaggcggaagtgccgcgcttagccaggcgcaaagtctcagtatgcaggcggagtcc
gccaaactaaaagcgttagtcgacgaactggagttggcgcaactgtccgccaacaaccgg
caggaactggctcgtctgcgttccgagctggcggaaaaacagagtcagcaattggatgcg
tatcttcaggcgctgcgcaatcagctcaacagcctgcgtcaacgtgaagcggaacgcgcg
ctggaaagcactgagctgctggcggaaaacagcgccggtttgccggaaggcatcgtcgaa
caatttaaagtcaaccgcgggctgtcacaggcgctcaatcaacaagcgcagcggatggat
ctggtcgcctcgcagcagcgacaggccaccagccaaacgttacaggtgcgtcaggcgctc
aatacgctgcgggagcagtcgcaatggcttggcgtgtccaacatgcttggcgaagcgctg
cgcgcgcaggtcgcccgtctgccagagatgcctaagccgcagcagcttgatacggaaatg
gcgcagctacgcgttcaccgtatgcgctatgaagaattactcaataagcaaccgcagcta
cggcaaatacgtcaggccaatggacaaccactgaccgccgagcaaaaccagattcttgac
gcccagcttcgcactcagcgcgagctgctcaactctttgttacagggcggcgacacgctg
atcctggagttgaccaaactgaaagtctccaacagccaactggaggatgcgcttaaagag
gttaatgaagcgacccaccgttatctgttctggaccgctgacgttagcccgctatcgctc
tcctggcctgttgatttggttcaggatttacgtcggcttatctcattagatacgtttaat
cagttaggtaaagccagcatcatgatgctgaccagcaaagagacgctactgccgttattc
ggcgcgctggcgctggtcgggtttagcctctattcacgccaacacttcaaccggttcctt
gagcgctcggcctcgcgcgtcgggaaagtcacccaggatcacttctcgctgacgctgcga
acggtgttctggtcgattctggtcgcctcgccgctgcccgtcttgtgggcgacgctcggc
tatggtctacaggaagcctggccgtatccgctggccgtcgccatcggcgatggcgtgacg
gcgacagtaccgctgttgtgggtagtcatgatttgcgccgcttttgcccgccctaatggt
ctgtttgtggcgcatttcggctggccgcgaaaccgggtagcgaaagcgatgcgctactac
ctgatgagcattgggctgatcgtgccgctcattatggcagtgatcatgtttgataatctt
aacgatcgggagttttccggctcgttgggccgcctttgcttcatcctgatatgcggcgcg
ctggcgctggtcacgctgagtctgaaaaaagcgggcatcccgctctatcttgataaagaa
ggcaacggcgacaacatggtcaacagcctgttgtggaatatgttgatgggcgcgccgctt
atcgcgattctggcggcggcggtgggttatctggccacggcgcaggcgctactggcgaga
ctggaaacctcggtcgccatctggttcctgttgctggtcatttatcacgtcattcgccgc
tggatgctgatccaacgacgccgactggcttttgaccgcgccaaacatcgtcgggcggaa
atgctggcgcagcgcgcgcgcggcgaagaagaaccggcgcactcctccagcctggaaggc
gcggtcgacatcgatgaaagtgaaatcgatcttgacgctattagcgctcagtcgctgcgt
ctggttcgctcaattctgatgcttatcgccctgctatcggtaattgtactgtggtcggaa
atccactcggcattcggcttcctggagaatatttcgctgtgggatgtcacctctacggtg
caaggcgtggaaagtctggagccgattaccctgggggcggtgctcattgcgattctggtc
tttatcatcaccacgcagttggtgcgtaatctgcctgcgctgctggagctggcgttatta
cagcatctcgatttaacgccaggtaccggttacgccatcacgaccatcaccaaatatctg
ttaatgctgattggcgggctggtcggtttctcgatgatcggcattgagtggtcgaagcta
caatggctggttgccgcgctcggcgttgggcttggttttggcctgcaagaaattttcgct
aactttatctccggcctgattattttgtttgaaaagccgattcgtatcggcgatacggtg
accattcgcgatctcaccggcagcgtgaccaaaatcaatacccgcgccaccaccatcagc
gactgggatcgtaaagagattatcgtgccgaataaagcctttatcaccgaacagtttatc
aactggtcgctgtctgactccgttacgcgcgtggtgttaaccatcccggcgccggcggat
gccaatagcgaagaggtgacgcaaattctgctgacggcggcgcagcgctgttctttggtg
cttgataacccgccgcctgaaatctttctggtggatctccagcagggtattcaaattttt
gaactgcgtatctatgccgcggaaatgggacaccgtatgccattacgccatgagatccac
caattgattctggctggcttccgcgagcacggtattgatatgccgttcccgccgttccag
atgcgtctggagagtctcggcggtaaacaaacggggagaacgttaacgtcagcgggtaaa
accagccgcccggcggggagtttgtag
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