Streptomyces explomaris: SLV14_000387
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Entry
SLV14_000387 CDS
T11122
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sexp Streptomyces explomaris
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sexp03021
]
SLV14_000387
Transcription machinery [BR:
sexp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLV14_000387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_AsnC-type
DUF7343
MarR_2
Sigma70_ECF
HTH_24
HTH_3
HTH_23
MarR
KORA
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UYB38065
LinkDB
All DBs
Position
complement(419020..419907)
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AA seq
295 aa
AA seq
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MRTNSTMKAGTEPETTSKVCAVPAPTVLPQIPAPQRVAPADARELSKLFLQRLETVEEGT
PEYQYVRNTLIEMNLSLVRYVARRFSSRRESMEDVLQVGTIGLIKAIDRYDPSRDVEFTT
LAVPYIQGEIKRFFRDTTWSVRVPRRLQELRIDLARAREELEGQGSHEPSVAELAGHLDM
TEEEVAEGLVACNGYDSDSIDRPIQAGGGGKQQTGLVADLIGTEDPALALAEDIQALKPH
LAELDDRDRTLLQLRFGAEMTQAEIGEELGLSQMHVSRLLTRACTTLRKALLAEG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccaacagcaccatgaaggcaggaacggagccggagaccacgtcgaaggtgtgt
gccgttccggctccgacggtgctgccgcagatccccgctccgcagcgcgtcgccccggca
gacgcacgggagttgtccaagctcttccttcagcggctggagacggtggaggagggcacg
cccgagtaccagtacgtgcggaacaccctcatcgagatgaacctctctctggtgcgctat
gtcgcccgccggttctccagccgcagggagtcgatggaggacgttctgcaggtcgggacg
atcggtctgatcaaggcgatcgaccgctacgacccgtcccgtgacgtggagttcacgacg
ctggccgtcccgtacatccagggtgagatcaagcggttcttccgcgacaccacctggtcg
gtgcgggtgccgcggcgcctgcaggagctgcggatcgacctcgcccgtgcccgggaagag
ctggaggggcaggggagccacgagccgtccgtcgcggagctcgccggccacctcgacatg
acggaggaggaggtggccgagggcctggtggcctgcaacggctatgacagcgattccatc
gaccggcccatccaggccggcggtggcggcaagcagcagaccggtctcgtcgccgacctc
atcggcaccgaggaccccgccctcgccctggccgaagacatccaggccctcaagccgcac
ctggccgagctcgacgaccgcgaccgcaccctcctccagctgcgcttcggggcagagatg
acacaggccgagatcggcgaggagctcggtctctcccagatgcatgtctcgcgcctgctg
acccgcgcctgcaccaccctgcgcaaggcactgctcgccgagggatga
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