Streptomyces explomaris: SLV14_000471
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Entry
SLV14_000471 CDS
T11122
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
sexp Streptomyces explomaris
Pathway
sexp00523
Polyketide sugar unit biosynthesis
sexp01100
Metabolic pathways
sexp01110
Biosynthesis of secondary metabolites
sexp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SLV14_000471 (rfbH)
Enzymes [BR:
sexp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
SLV14_000471 (rfbH)
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Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UYB38141
LinkDB
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Position
520896..522197
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AA seq
433 aa
AA seq
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MGYIKSDILELVRKYHQEDVTSGFVPGVTPVAASGAVLDEDDRVALVAAALDLKIAAGTS
SRRFERALAKYFGLRKAHLTNSGSSANLLALSALTSPQLEDLRLVPGDEVVTVAAGFPTT
VNPIIQNGLVPVFVDVELGTYNTSPDRIEEAIGPRTRAIMIAHALGNPFAVEEVAEIAND
RGMFLIEDNCDAMGSTYRGRLTGTFGDLATESFYPAHHITMGEGGCVVTDNMVLARIVES
LRDWGRDCWCEPGEDNRCFKRFEQQMGTLPYGYDHKYIFSHVGYNLKSTDLQAALGLTQI
GRIDEFGATRQHNWARLRAGLDGLPHLLLPEPTPDSDPSWFGFVITVREGAPFSTAELID
HLESRRVATRRFFAGNLTRHPAYLEREFRVSGSLTNSDIITERTFWIGVFPGLTDEMIDH
SIRSVTEFVLSRT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggggtacatcaagagtgacattctggagctggtacgcaagtaccaccaggaggacgtc
acgtccggattcgtgccaggggtgacgccggtggcggcttcgggcgcggtcctcgacgag
gacgaccgggtcgcccttgtcgcagcggccctggacctgaagatcgcggccgggaccagt
tcccgcaggttcgagcgcgccctcgccaagtacttcgggctgcggaaggcacatctgacc
aactccggctcgtcggccaacctgctggcgctcagtgcgctgacctcaccccagttggag
gatctgcggctggtgccgggggacgaggtggtcacggtggcagccggtttccccacgacg
gtgaacccgatcattcagaacggtctggtgccggtcttcgtcgatgtcgagctcggcacg
tacaacacctcccccgaccgcatcgaggaggccatcggcccgcgcacccgggccatcatg
atcgcccatgcgctcggcaacccgttcgctgtcgaggaggtcgcggagatcgccaacgac
cgggggatgttcctcatcgaggacaactgcgatgcgatgggcagtacgtaccgcggcagg
ctgacggggaccttcggggacctggcgacggagagcttctatccggcccaccacatcacc
atgggcgagggtgggtgtgtggtgacggacaacatggtgctggcccggatcgtggagtcg
ctgcgggactggggtcgcgactgctggtgcgagcccggtgaggacaatcgctgcttcaag
cggttcgagcagcagatgggcaccctgccgtacggctacgaccacaagtacatcttctcg
cacgtcgggtacaacctgaagtcgaccgacctgcaggccgcgctcgggctcacccagatc
gggaggatcgacgagttcggtgccacccggcagcacaactgggcccggctccgcgccggg
ctggacggcctgccccacctcctgcttcccgagcccacgccggacagtgacccgagctgg
ttcggcttcgtgatcaccgttcgggagggcgcgcccttctcgaccgccgaactgatcgac
cacctggagtcccggcgggtggccacccgccgcttcttcgccggcaacctcacccgccac
ccggcctacctggagcgggagttccgggtgagcgggtcgctgaccaacagcgacatcatc
accgaacgcaccttctggatcggggtgttccccgggctgaccgacgagatgatcgaccac
agcatccgcagcgtcaccgagttcgtcctctcccgcacctga
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