Streptomyces explomaris: SLV14_000827
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Entry
SLV14_000827 CDS
T11122
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sexp Streptomyces explomaris
Pathway
sexp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SLV14_000827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sexp03400
]
SLV14_000827
DNA repair and recombination proteins [BR:
sexp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SLV14_000827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UYB38465
LinkDB
All DBs
Position
1000973..1002088
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AA seq
371 aa
AA seq
DB search
MRSIWNGSISFGLVTIPVKTYSATDRTSSVSFVRIHDKDGAQIQYRKICELDGEEVPNEE
VGKGYQAPGDDAIVPITDEDLSRLPMPTAKTLSILSFVDPDEIDPLQMDKAYYLGPNGAA
ATKPYALLREALEDHRKVALGKVAMRGRESLAMLRAHNGAIVMHTLLWPDQLRPATGVAP
DEVELRENELTLAETLMDSLGELDPAELHDDYREAVEELVAAKLEGEPVAPAASGTSGAQ
VIDLTAALEKSVRAARGGQEAGTEAEPASVTPIRGRKAAKEGEAEQGAAKKSGAAGKKAT
AKKTASATAKKAPAKKTAPAPKAAGGRAKGTSTAKKTAATGTSKKAASKSTAKKSTAKKT
AARKTSKRSSA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctatatggaatgggtccatatcgttcggtctggtcaccatccccgtgaagacc
tacagcgccaccgaccgcacctcgtcggtgtctttcgtgcgcatccacgataaggacggc
gcacagatccagtaccggaagatctgtgaactggacggcgaggaagtccctaacgaggaa
gtcggcaagggctatcaggcgccgggtgacgacgccatcgtgccgatcaccgacgaggat
ctgtcccggctgccgatgccgaccgccaagacgctgtcgatcctgtcgttcgtcgacccc
gacgagatcgacccgctccagatggacaaggcctactacctggggcccaacggggcggcc
gccaccaagccgtacgcgctgctgcgggaggccctggaggaccaccggaaggtcgcgctc
ggcaaggtggcgatgcggggacgggagtcactggcgatgctgcgggcgcacaacggggcg
atcgtgatgcatacgctgctgtggccggatcagctccggcccgccaccggtgtggcaccc
gacgaggtcgagctccgcgagaacgagctgacactggccgagaccctgatggactccctg
ggcgagctggaccccgcggagctccacgacgactaccgcgaggccgtcgaggagctggtc
gccgccaagctggagggcgagccggtcgcccccgcggcgtcgggcacgtccggcgcccag
gtcatcgatctcacggcggcgctggagaagagtgtgcgcgcggcccggggaggccaggag
gccggtaccgaggcggagccggcgtccgtgacgcccatacgggggcggaaggcggcgaag
gagggcgaggccgagcagggtgccgccaagaagagcggtgcggccggcaagaaggcaacg
gcgaagaagaccgcctcggccaccgcgaagaaggcgcccgcgaagaagacggcgcccgcc
ccgaaggccgccggcgggcgggcgaagggcacatcgacggccaagaagaccgcagccacc
ggtacttccaagaaggccgcatcgaagagcactgccaagaagagcaccgccaagaagacc
gcggccaggaaaacgagcaagaggtcgtccgcgtag
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