KEGG   Streptomyces explomaris: SLV14_000827
Entry
SLV14_000827      CDS       T11122                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
sexp  Streptomyces explomaris
Pathway
sexp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sexp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SLV14_000827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sexp03400]
    SLV14_000827
DNA repair and recombination proteins [BR:sexp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SLV14_000827
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: UYB38465
LinkDB
Position
1000973..1002088
AA seq 371 aa
MRSIWNGSISFGLVTIPVKTYSATDRTSSVSFVRIHDKDGAQIQYRKICELDGEEVPNEE
VGKGYQAPGDDAIVPITDEDLSRLPMPTAKTLSILSFVDPDEIDPLQMDKAYYLGPNGAA
ATKPYALLREALEDHRKVALGKVAMRGRESLAMLRAHNGAIVMHTLLWPDQLRPATGVAP
DEVELRENELTLAETLMDSLGELDPAELHDDYREAVEELVAAKLEGEPVAPAASGTSGAQ
VIDLTAALEKSVRAARGGQEAGTEAEPASVTPIRGRKAAKEGEAEQGAAKKSGAAGKKAT
AKKTASATAKKAPAKKTAPAPKAAGGRAKGTSTAKKTAATGTSKKAASKSTAKKSTAKKT
AARKTSKRSSA
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgcgttctatatggaatgggtccatatcgttcggtctggtcaccatccccgtgaagacc
tacagcgccaccgaccgcacctcgtcggtgtctttcgtgcgcatccacgataaggacggc
gcacagatccagtaccggaagatctgtgaactggacggcgaggaagtccctaacgaggaa
gtcggcaagggctatcaggcgccgggtgacgacgccatcgtgccgatcaccgacgaggat
ctgtcccggctgccgatgccgaccgccaagacgctgtcgatcctgtcgttcgtcgacccc
gacgagatcgacccgctccagatggacaaggcctactacctggggcccaacggggcggcc
gccaccaagccgtacgcgctgctgcgggaggccctggaggaccaccggaaggtcgcgctc
ggcaaggtggcgatgcggggacgggagtcactggcgatgctgcgggcgcacaacggggcg
atcgtgatgcatacgctgctgtggccggatcagctccggcccgccaccggtgtggcaccc
gacgaggtcgagctccgcgagaacgagctgacactggccgagaccctgatggactccctg
ggcgagctggaccccgcggagctccacgacgactaccgcgaggccgtcgaggagctggtc
gccgccaagctggagggcgagccggtcgcccccgcggcgtcgggcacgtccggcgcccag
gtcatcgatctcacggcggcgctggagaagagtgtgcgcgcggcccggggaggccaggag
gccggtaccgaggcggagccggcgtccgtgacgcccatacgggggcggaaggcggcgaag
gagggcgaggccgagcagggtgccgccaagaagagcggtgcggccggcaagaaggcaacg
gcgaagaagaccgcctcggccaccgcgaagaaggcgcccgcgaagaagacggcgcccgcc
ccgaaggccgccggcgggcgggcgaagggcacatcgacggccaagaagaccgcagccacc
ggtacttccaagaaggccgcatcgaagagcactgccaagaagagcaccgccaagaagacc
gcggccaggaaaacgagcaagaggtcgtccgcgtag

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