Streptomyces explomaris: SLV14_000985
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Entry
SLV14_000985 CDS
T11122
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sexp Streptomyces explomaris
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sexp03016
]
SLV14_000985 (truD)
Enzymes [BR:
sexp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SLV14_000985 (truD)
Transfer RNA biogenesis [BR:
sexp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SLV14_000985 (truD)
Prokaryotic type
SLV14_000985 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UYB38604
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All DBs
Position
1178131..1179159
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AA seq
342 aa
AA seq
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MTGTLVLKHRQEDFRVRENLVVALTDAAAATHRYLLLHKRGHTTMEAVRLVADRLGVARE
DVGYAGLKDEDGITEQLLSVPLASLAADALPAAGLVEGAGPERMLSLSHYGFGREPLTVG
QLNGNGFRVVLRDLDEAAAARLVDRQRINLLFVNYYDTQRFGVPGGPKRTHLVGEALLKE
DWALARQELAGLGAPESGEAARWTGQDRALFRALDPRTVAFYLAAYSSYDWNARVRDLIG
SLCPDDAPESAVDGLPYRFPTTAEGVAALLAACHELPYTRYAYRDGPVERPTTRPTVIQT
AITVGADGPDDAFPGRRAVEVSFLLPSGCYATAALRQLVLRR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcaccctggtgctcaagcaccgccaggaggacttccgggtacgggagaacctc
gtcgtcgcgctgaccgacgccgcagcggccacccaccgctacctcctgctgcacaaacgc
ggccacacgacgatggaggccgtgcggctcgtggcggaccggctcggtgtggcccgcgag
gacgtcggctacgcgggcctcaaggacgaggacggcatcacggagcagctgctgtccgtg
ccgcttgcttcccttgccgccgacgcgctgcccgccgccggtctcgtcgaaggggcgggg
ccggagcggatgctgagcctgagccactacggtttcggccgtgagccactgaccgtcggg
cagctcaacggcaacggcttccgggtggtgctgcgggacctcgacgaggcggccgccgcc
cggctcgtggaccggcagcggatcaacctgctgttcgtcaactactacgacacccagcgc
ttcggcgtacccggcggccccaaacgcacccacctggtcggcgaggcgctgctgaaggag
gactgggccctcgcacggcaggagttggcggggctcggcgctccggagagcggcgaggcc
gcccggtggaccgggcaggaccgggccctcttccgggcgctcgacccccggaccgtggcc
ttctacctggccgcgtactcctcctacgactggaacgcgcgggtccgggacctgatcggc
tctctctgcccggacgacgcccccgagagcgccgtggacggactgccctaccgctttccc
accacggcggaaggcgtggccgcgctcctcgcggcctgtcacgaactgccgtacacccgc
tacgcgtaccgggacggccccgtcgagcggccgacgacccggcccacggtcatccagacg
gcgatcaccgtcggagcggacggaccggacgacgccttccccgggcgccgggcggtggag
gtctccttcctgttgccctcggggtgttacgccacggcggcgctgcggcagttggtcctc
cgccgctga
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