Streptomyces explomaris: SLV14_001964
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Entry
SLV14_001964 CDS
T11122
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sexp Streptomyces explomaris
Brite
KEGG Orthology (KO) [BR:
sexp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sexp03021
]
SLV14_001964
Transcription machinery [BR:
sexp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLV14_001964
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
MarR_2
PF0610-like_N
DUF7343
HTH_3
MarR
HTH_38
7TMR-HDED
HTH_37
Annexin_2
Sigma70_ECF
GerE
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UYB39467
LinkDB
All DBs
Position
complement(2302991..2303851)
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AA seq
286 aa
AA seq
DB search
MTTIVSETTTEQRQTHTASALPEVTQPQKVAPRDARELSKQFFERLQALEEGTHEYQYAR
NTLIEMNMSMVRYVARRYRNRGDDMEDVIQVGTIGLIKAIDRFDLAREVEFSTFAVPYIL
GEIKRFFRDTGWAVHVPRRLQELRSDLAKAKEHLAAKFDRDPTVRELAAHLDLSEDDVIE
GIVAANGYTAGSLDTPADPDPSEQRRTLVDVLGENDPALEAVEDFHVLAPLLGMLDARER
RLIELRFGQEMTQSQIGEELGVSQMHVSRLLTRTLSKLRAGMLTER
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatcgtgagcgagaccacgaccgagcagcgacagacccacacggcctctgca
ctgccggaggtgacgcaaccgcagaaggtggctcctcgcgacgcgagggagttgtcgaag
cagttcttcgagcggcttcaggctctcgaagagggcacgcacgagtaccagtacgcgcgt
aacaccctcatcgagatgaatatgtcgatggtgcgctatgttgcccgccgctaccgcaat
cgcggcgacgacatggaagacgtcatccaggtgggcaccatcggtctgatcaaggccatc
gaccggttcgacctcgcgcgtgaggtggagttctccacctttgccgtcccctacatcctg
ggcgagatcaagcggttcttccgtgacaccggctgggccgtccatgtgccccgccgcctt
caggagctgcgcagcgacctggccaaggccaaggagcacctcgccgccaagttcgaccgc
gaccccaccgtccgcgaactggccgcccacctcgatctgtcggaggacgacgtcatcgag
ggcatcgtcgccgccaacggctacaccgccggttcgctcgacacgcccgccgaccccgac
ccgtcggagcagcgccgcactctcgtcgacgttctgggggagaacgacccggcgctggag
gccgtagaggacttccatgtgctcgctccgctgctcggcatgctcgacgcccgggagcgg
cgcctcatcgagctgcgcttcggtcaggagatgacccagtcgcagatcggcgaggagctc
ggtgtgtcccagatgcatgtctcccggctgctcacccgcaccctgtcgaagcttcgtgcc
ggcatgctcaccgaacgctga
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